Gene
| Gene Model ID | pfu_aug1.0_4389.1_23563 |
|---|---|
| Locus | scaffold4389.1 : 34405 ... 45075 : - |
| To GenomeBrowser | scaffold4389.1:34405..45075 |
| Genes list of scaffold | scaffold4389.1 |
| Synonym | pfu_aug2.0_353.1_10663 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4389.1_23563.t1 | 2 | 1 | Neugrin | 84 | 267 | 7.1e-14 | 52.1 | 9.6e-18 | 7.1e-14 | 52.1 |
| pfu_aug1.0_4389.1_23563.t1 | 2 | 2 | Neugrin | 398 | 458 | 7.1e-14 | 52.1 | 0.18 | 1300.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4389.1_23563.t1 | gi|346468951|gb|AEO34320.1| | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_4389.1_23563.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4389.1_23563.t1 atgtatcccggtcattacggcaccttgaggatggattcaacaaagctgtccattttgaagggaaaagtagaaacagaata tcgagctgtaatcaccgtaaggtggtctagttggagttcttttccttattattctattagccttacctgtaagaagagaa ttagcaaagacgatggagataggagatttttgaaaaggaagatattagaaaagaaattaagaaataagtttctacgagag tataacttgctgacatggaatgccaaacaacagatgcagtatttgaataaagaatttccagatgagtggactgtagaaag actagcagagagttttcctgtcagtgaatttggagtcgcacaaattcttaaatcaaagatcaagatgagaacaaaagaag acgttaatattcatgacatgaagctagaaaatgcaaatggaaattctaatttgccgtttccatctttaccagaactgcct agagaagacgaacttagtactataaatagcaacagtatgaggcttgaagcaggtatgtttgaatcatatctgatgagaat gtctgaaaaaacacaagcgagcaaaagtagtatttgtcatggaagtagacaagataaaagactaccagggatgaaggaag gcctgaaaatgttgactgggtctttgatggaagaagctgccaagaaaggtttgaacaacgagacatataaaagaaaatta ggcaaacagggtcaaaatgcactcacgaatacgaaagagacacacaatacgaataagaaagagacacacaatattaactt tgatacttctcaaaaagatatgattggtagaggttccctcaaacagggtgttagtgatgctcgaagataccaaacaattg atgctgcttttgatttagatgacagtaaagattttgcaaaaccaacacaaagaagagaccctacaagcaagaaaactaat agcatagaaaaaaatatatctcaccaagaactggtgggagaagaatcccccaaacaggttgtaagaaaagttacaaaata caaagcactaagtgctgcttttggtttagatgacaatgaagattttgcaaagccaacacgaagaggagaaattacaagta agagacctgatactacaaaagacctggcaacaaaatctcttaaatctcaaacactagatacaaccatggaattattgagc attcaggacaacagcactctgtctgatagcacaagcaaatcctatacatcactgaattcaaattatcagggttctcctgt acaaaacagtagacagccgaggacacctgactctgagaaagccatatcagtcaaccaaccagatgctcatgttgaagtaa aagcagacaaattgatggatattgatgacaatttagtaaacactttaatgagagagcaagtaatgaatgataaagatgta gctttgagaagacgtcaaagaaaacgcatagagaaactgaaagatgattggaacacatcatcgccacatttctacgaaaa acttcaaatgcacgaaacatttatgatacagaaaccaacgatgaatgcaacaagttctacaagaaatgaccattattccg aatcaaacaaagtatttgaaaggaagatcgattttaataccaatgaaaaccgtaacttcacctcgggaaagcagcctaca tttcaaaacagactaagcagcaactgggacagaaattttagagaggatgagtattacgatggtaagaagcaaaaggaatt ttcagtttatggaaaccggaaaataaaatctgcagaacagagagactttgaggaaaaattatcgtatgagaatataataa cagctggtaaaagaggatctgataaacaacacattgtaaaacatccttactattatgatccagtgaccggctaccaaaat ccatacggaaagtttgtcaaagaggatcgtgtcctgtggaagaggcaagataatatgaagaagggaaaatattataaaaa ggatgatactgtttatgacagtgatggtgaaatactgtttaaatga |
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Protein
| Protein ID | pfu_aug1.0_4389.1_23563.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4389.1_23563.t1 MYPGHYGTLRMDSTKLSILKGKVETEYRAVITVRWSSWSSFPYYSISLTCKKRISKDDGDRRFLKRKILEKKLRNKFLRE YNLLTWNAKQQMQYLNKEFPDEWTVERLAESFPVSEFGVAQILKSKIKMRTKEDVNIHDMKLENANGNSNLPFPSLPELP REDELSTINSNSMRLEAGMFESYLMRMSEKTQASKSSICHGSRQDKRLPGMKEGLKMLTGSLMEEAAKKGLNNETYKRKL GKQGQNALTNTKETHNTNKKETHNINFDTSQKDMIGRGSLKQGVSDARRYQTIDAAFDLDDSKDFAKPTQRRDPTSKKTN SIEKNISHQELVGEESPKQVVRKVTKYKALSAAFGLDDNEDFAKPTRRGEITSKRPDTTKDLATKSLKSQTLDTTMELLS IQDNSTLSDSTSKSYTSLNSNYQGSPVQNSRQPRTPDSEKAISVNQPDAHVEVKADKLMDIDDNLVNTLMREQVMNDKDV ALRRRQRKRIEKLKDDWNTSSPHFYEKLQMHETFMIQKPTMNATSSTRNDHYSESNKVFERKIDFNTNENRNFTSGKQPT FQNRLSSNWDRNFREDEYYDGKKQKEFSVYGNRKIKSAEQRDFEEKLSYENIITAGKRGSDKQHIVKHPYYYDPVTGYQN PYGKFVKEDRVLWKRQDNMKKGKYYKKDDTVYDSDGEILFK |
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