Gene
Gene Model ID | pfu_aug1.0_43992.1_19903 |
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Locus | scaffold43992.1 : 10376 ... 13763 : + |
To GenomeBrowser | scaffold43992.1:10376..13763 |
Genes list of scaffold | scaffold43992.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
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Gene name | Tbx19 |
Description | BLAST hits to brachyury and Tbx19.Simple NJ tree also show an affinity to HsTbx19 and HsBra. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_43992.1_19903.t1 | 1 | 1 | T-box | 2 | 59 | 1.8e-13 | 50.3 | 1.9e-17 | 2.8e-13 | 49.7 |
Transcript
Transcript ID | pfu_aug1.0_43992.1_19903.t1 |
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Definition | - |
>pfu_aug1.0_43992.1_19903.t1 atgcgttataagtacgtcaacgatgcttgggtccccgtgggtcgggctgaaacattccacaccaatgctcccttcgttca ccacgaatgcccatgctatggagaagacttgatgagaaaaagtctgtcgttctctcgagtcaagttgaccaatagcaaag agtttgcagacggaaagacgtatgaaaaggaatttatccaaaatcttcaaaagcaaagaaaaattgatgatgtgaaatgt ttaattggtacttctcggtacctggatgatattcttactatctacaatcctgacaatcctgtttttgaaaagtataaaaa tgttgtttatccacaagaaatgattctaaacaaggcaaacgctacaaatacagaaacaccatttttggacctaaatatca aaattgtaaatggagagattcatacaagtgtgtatgactaa |
Protein
Protein ID | pfu_aug1.0_43992.1_19903.t1 |
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Definition | - |
>pfu_aug1.0_43992.1_19903.t1 MRYKYVNDAWVPVGRAETFHTNAPFVHHECPCYGEDLMRKSLSFSRVKLTNSKEFADGKTYEKEFIQNLQKQRKIDDVKC LIGTSRYLDDILTIYNPDNPVFEKYKNVVYPQEMILNKANATNTETPFLDLNIKIVNGEIHTSVYD |