Gene
| Gene Model ID | pfu_aug1.0_4400.1_30684 |
|---|---|
| Locus | scaffold4400.1 : 12711 ... 20485 : - |
| To GenomeBrowser | scaffold4400.1:12711..20485 |
| Genes list of scaffold | scaffold4400.1 |
| Synonym | pfu_aug2.0_3127.1_25649 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4400.1_30684.t1 | 2 | 1 | Polysacc_deac_1 | 62 | 187 | 2.2e-07 | 30.5 | 3.7e-11 | 5.5e-07 | 29.2 |
| pfu_aug1.0_4400.1_30684.t1 | 2 | 2 | Polysacc_deac_1 | 362 | 385 | 2.2e-07 | 30.5 | 0.098 | 1500.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4400.1_30684.t1 | gi|322789123|gb|EFZ14538.1| | hypothetical protein SINV_14216, partial [Solenopsis invicta] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4400.1_30684.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4400.1_30684.t1 atggctagacgcaccggaatactaaattcgaatctcatattcgtttcgattttcttcattctactgttctgtgacactct gggatatgagtcagcatgcatgagatgtgaaagaaaccatcaatgtaagcccccaaaatgtgtttgctgtggtagagata tgcctttaccaacaaaagatgttccacaaatggtatttttcactttcgatgatgctgtcaatacacatatagccggtttc tacagacaactatttgattcaaaccgtaaaaaccctaacggatgtccgataagtatgactctatttatttctcatgcaaa tacagtttatacgttagtcagggaattctatcagaaaggtatggaaattgcatctcatagcgtatcacatgcacatccta gtagcaaaacttttcgaaacgaggctaggaaacaaaaagaaaacttagctcgaatggctcgtataccgtcaacaaaaata aaaggctggagaagcccctttctggaaccattaggggatgcacagcccaacaccttacaaaatctcggatacgcctacga tgctacattgacagtcgcaagaggatcccgcggaacaaaagctccaaaaccgttcactctggattacggttggccatatg actgtaaaattaagccatgtcctcgaagaagtcataagggattttgggaagtacctgttatatcaattaaggactatctc ggtaaatatgaatgcgtatacgtagatggatgcaacaacccaccgccagatgaagagtcggcttttaactttctatggga gaacttccttacttactacaaaggcaacagagccccatttgggatcaatatgcatgcagcgtggttctatcaccaagatc gtttgaaagctatggaccgattcatccaagaacttgtcaagcttgatgacgtctatgtcgtctctgtgaaacaagtaatc gcttggttacaaaaccccacacccttacaggacgtggcatcatttgaggcttggggctgcacacaaatgaacaaaaattc gtcagcctttcatctacggaacacaaaaattcagagaagaattcatgaaatcaagcaatcaaatttaaaaaagcagaacg aagagcacgtgagaaaacattacgaatggaagcaaaaacaaaacgtccgaaagcacacttcaatttcctcacatcgaaaa tcaaatcccggtcattatttacaaaggagtaacatctggcaaggcttaacacaacctggttcgtcgtggtccacaattgg aagcaatagacgtcaacctaaaaggagcgagtttacttggtcatctccttctatgtcttggcaaagccttttggcaaaat atgcacaaatacaaagcaaaaaagcacaggaaagaaaaccacgactgtctcaagcccaaattgcacgagaaaaagagaga aatatgaaagaacagaaacgtataaaagaacaacagcgtattgcgaaacaaaaacgtatagaaaaagaagcagctgaaat tgccaaacagagacaaaaagaagagcaagctaaattagcagaaagtaagcgaattgcggaagaaaagaaaagaattgaag aaattcgtttagcaacagagaggcaaaaagctaatgaacgccgacttgctgaagagaggaggttagtagaagaaaagagg ttagcagaagaaaagaggttagcagaagaaaagaggttagcggatgaaagacgcatggcagaagaaaaaaggaaagcaga agcagaacgtctcatagaggagaagcgaagagccgaggagcgtcgaattgcagagaagagacgaaaagcggagcaaaaac gtttagctgaagagaggagaaaagcagaggaacgccgattagcggaagagaaacgaaaggctgaggagcaacgtcttgct gaagagaggcgtttggccgaggagcgtcgaatcctcgaagaaaagctaaatgcgttctatattgcagaccacattcgaaa acttaaattgtcagaatcgggctccaggaatcgatgtctccacgcgtaa |
|
Protein
| Protein ID | pfu_aug1.0_4400.1_30684.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4400.1_30684.t1 MARRTGILNSNLIFVSIFFILLFCDTLGYESACMRCERNHQCKPPKCVCCGRDMPLPTKDVPQMVFFTFDDAVNTHIAGF YRQLFDSNRKNPNGCPISMTLFISHANTVYTLVREFYQKGMEIASHSVSHAHPSSKTFRNEARKQKENLARMARIPSTKI KGWRSPFLEPLGDAQPNTLQNLGYAYDATLTVARGSRGTKAPKPFTLDYGWPYDCKIKPCPRRSHKGFWEVPVISIKDYL GKYECVYVDGCNNPPPDEESAFNFLWENFLTYYKGNRAPFGINMHAAWFYHQDRLKAMDRFIQELVKLDDVYVVSVKQVI AWLQNPTPLQDVASFEAWGCTQMNKNSSAFHLRNTKIQRRIHEIKQSNLKKQNEEHVRKHYEWKQKQNVRKHTSISSHRK SNPGHYLQRSNIWQGLTQPGSSWSTIGSNRRQPKRSEFTWSSPSMSWQSLLAKYAQIQSKKAQERKPRLSQAQIAREKER NMKEQKRIKEQQRIAKQKRIEKEAAEIAKQRQKEEQAKLAESKRIAEEKKRIEEIRLATERQKANERRLAEERRLVEEKR LAEEKRLAEEKRLADERRMAEEKRKAEAERLIEEKRRAEERRIAEKRRKAEQKRLAEERRKAEERRLAEEKRKAEEQRLA EERRLAEERRILEEKLNAFYIADHIRKLKLSESGSRNRCLHA |
|