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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4400.1_30685
Locus scaffold4400.1 : 25251 ... 32495 : -
To GenomeBrowser scaffold4400.1:25251..32495
Genes list of scaffold scaffold4400.1
Synonym pfu_aug2.0_1080.1_01364

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4400.1_30685.t1 1 1 Methyltransf_21 84 253 1.1e-19 71.0 7.8e-23 1.7e-19 70.4

Transcript
Transcript IDpfu_aug1.0_4400.1_30685.t1
Definition-
>pfu_aug1.0_4400.1_30685.t1
atgaacatatctactttcaagacactaaaaacgggggttcgaatttgtaattgtactttccccagcatgaacgtgaaaac
gaatatttaccgattaatttcttccgtggattcaaaacatattaccttgcatggatatggttcttgggatttcatttcca
aaagtgtcgaacagagaggatattttgaaccagaaattgacagagtggtaaattacctcttaacaagaaatccctcagct
cttttcatggacattggagcaaacataggaattcggtctttacaagttgcaaaatatggcagaaaagttattgctgtaga
ggctttgcaagaaaatgtttaccgtctttgtaactccatcaaggacaatggggtctcagataaagttatagtaatacaca
atgctctagcagagagacaaaaggtagtacaatttggaaggtataaggactgtatgggatgtagctttgttgctgatgat
gaagatgttatccgacctaggaagaaagggatgagggggctgtttgaggagaaaatacccgcagttacactggatgactt
tttgaaattagaagatgtaaactcatcgaagagcatcttcatgaaaatagatatcgagggttatgaacaccatattcttg
atggagcccacgagttcttcaaatctaaagacgtgattggaatggtcatggaatggaaatggcatagaggattggacagt
ggattgcatattttagagttcatgaggaaacataagtttttaccgtttagatttaattcacacggggataagtacgttct
tcttcgatggatggaatgtcaagtccggacaaatacatgtacaccttttgctgtgaaaatagacgatggctgtccaaagt
catatgtgttgggtacgcatgggtctttttaa

Protein
Protein IDpfu_aug1.0_4400.1_30685.t1
Definition-
>pfu_aug1.0_4400.1_30685.t1
MNISTFKTLKTGVRICNCTFPSMNVKTNIYRLISSVDSKHITLHGYGSWDFISKSVEQRGYFEPEIDRVVNYLLTRNPSA
LFMDIGANIGIRSLQVAKYGRKVIAVEALQENVYRLCNSIKDNGVSDKVIVIHNALAERQKVVQFGRYKDCMGCSFVADD
EDVIRPRKKGMRGLFEEKIPAVTLDDFLKLEDVNSSKSIFMKIDIEGYEHHILDGAHEFFKSKDVIGMVMEWKWHRGLDS
GLHILEFMRKHKFLPFRFNSHGDKYVLLRWMECQVRTNTCTPFAVKIDDGCPKSYVLGTHGSF

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