Gene
| Gene Model ID | pfu_aug1.0_4400.1_30688 |
|---|---|
| Locus | scaffold4400.1 : 53698 ... 58085 : - |
| To GenomeBrowser | scaffold4400.1:53698..58085 |
| Genes list of scaffold | scaffold4400.1 |
| Synonym | pfu_aug2.0_4785.1_19358 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4400.1_30688.t1 | 2 | 1 | Polysacc_deac_1 | 11 | 136 | 4.3e-08 | 32.8 | 4.6e-12 | 6.9e-08 | 32.1 |
| pfu_aug1.0_4400.1_30688.t1 | 2 | 2 | Polysacc_deac_1 | 319 | 334 | 4.3e-08 | 32.8 | 0.46 | 6900.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4400.1_30688.t1 | gi|332017042|gb|EGI57841.1| | hypothetical protein G5I_14028 [Acromyrmex echinatior] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4400.1_30688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4400.1_30688.t1 atgaatctgctggaaacggtgtccgagattccccaaatcgtattcttcactttcgacgacgcattgaccacccgagcagc ggaattttacaaccagctcttcaacgttacagataggaagaatccgaatggctgtccgatttcaatgacaatgtttattt ctcatcaggatacgaagtacaataaggttaatgaattttataagaaaggaatggaaatagcagcacacagtgtaactcat gaacatatgactaccaagaactttctacaagaagccaagacacaaaaaagtaaccttgcaaaattaggtggcgttccgga aaacgaaattgtgggatggagaagtcccttcttggaaccagttggcgatatgcagccagataaacttaaagaattgggtt atgtttacgatgctacacttacgtttagtaaaaggaatttatatgataaatcaccttctccatttaccctcgattttggt tggccttatgattgcaaagtaaaaccatgcccccttcgacgccatcttggattttgggaggttccggttgtatcactctt ggattacaagcatcagtatgattgtgtgtacgttgacggatgtaataatcctccccccgatgaatcaatgtcgtacaaat ttttgatggataatttcaatagctattacacaagatcaaaagtgcctttcggaattaatatgcatccgtcttggttctac attcctcatcgcctgaaggcaatggatagattcatccaaacgcttcttaaaatgaacgatgtatacattgtttcggtcga caaaatgattaagtggttgaaaaacccgacacctttgtcgaagcttaataactttgaaccatggggatgtccttctataa aacctcattcacacatgaacacgcaccgacgccacaatgggaggaatgcgtttaacttcaaaagttcaatttcacatcgg cacggattcagaggatcccgaaaaatgtcccgcgaggaagcccagcgacgtcatatccaagcacgcttacgtcaaattgc tcaaatgcgcgctcagttagcaatcgacagagagaaacaattaaatcagcaaaaacatcacaaccaggcacgtgataaat ggtggtctcgatcttccctacaccgtacccctaaaggacaccattcgcattcaaatggtcaccagtattcagcccatgat tctgtacattctaaaccaaagcctacgaaaaagaaaatagtaaaacggttccaaaattccaattttccaatgtag |
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Protein
| Protein ID | pfu_aug1.0_4400.1_30688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4400.1_30688.t1 MNLLETVSEIPQIVFFTFDDALTTRAAEFYNQLFNVTDRKNPNGCPISMTMFISHQDTKYNKVNEFYKKGMEIAAHSVTH EHMTTKNFLQEAKTQKSNLAKLGGVPENEIVGWRSPFLEPVGDMQPDKLKELGYVYDATLTFSKRNLYDKSPSPFTLDFG WPYDCKVKPCPLRRHLGFWEVPVVSLLDYKHQYDCVYVDGCNNPPPDESMSYKFLMDNFNSYYTRSKVPFGINMHPSWFY IPHRLKAMDRFIQTLLKMNDVYIVSVDKMIKWLKNPTPLSKLNNFEPWGCPSIKPHSHMNTHRRHNGRNAFNFKSSISHR HGFRGSRKMSREEAQRRHIQARLRQIAQMRAQLAIDREKQLNQQKHHNQARDKWWSRSSLHRTPKGHHSHSNGHQYSAHD SVHSKPKPTKKKIVKRFQNSNFPM |
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