Gene
| Gene Model ID | pfu_aug1.0_4402.1_08888 |
|---|---|
| Locus | scaffold4402.1 : 4204 ... 9385 : - |
| To GenomeBrowser | scaffold4402.1:4204..9385 |
| Genes list of scaffold | scaffold4402.1 |
| Synonym | pfu_aug2.0_32.1_06794 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4402.1_08888.t1 | 1 | 1 | Sulfotransfer_1 | 92 | 340 | 1.4e-31 | 109.7 | 3.9e-35 | 1.9e-31 | 109.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4402.1_08888.t1 | gi|348531066|ref|XP_003453031.1| | PREDICTED: heparan sulfate glucosamine 3-O-sulfotransferase 5 isoform X1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4402.1_08888.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4402.1_08888.t1 atgtccgtgaagtactctcccgtacccacaaatgacgtaggagagctaccccaaggatggtgtaggtgccaactccaccc aaattgcactaagaggaatattattgctttagtggtcattctttccttgtcatctgtattcattatatccgcctgtgtgg gaacatcttggatacagaactcacatttttgtcccgagaagcctaaagttattccactaccccattcacgtaagaaggga cttccccactacccacacacacaacgccgcctcccagactgtataatcataggtgtgcgtaaagggggcacccgggctct catcaattacctcaatctacatccggacatagtcacagcaccagaggaaattcattttttcgacgaccagcagaattaca gcaagggtctgagttggtaccgtagacagatgccttacaccttcagtgataaggttatcatagaaaagacgcctaactac tttgtagatgacaaggtaccttggcgaatccataattttagttcctctgtaaagctcattttgattgtccgtgacccgtt gtacagggcagtttctgattacacccaaatccgtgagaggcggttggggcaggggctcgagatggaggaatttgaagaat tggcattcaatggggaggaggaggtaagcgtggataacgtccgtacacaataccccgctattaacagatccctctattca taccatttgaccaagtggctacgctacttcagtctgagccagattcacattgtagatggggacaacatggtcagggaccc ggtacaggaaataaaaaaagtggaaaatttcctcagtctagaacacaaaatacagaaagactggatcgtgttcgatagaa ccaaaggtttccactgtgtaaaacctgataacaagcgctacaggtgtctgaataagactaaaggacgcaaacatccgcgc attgacccggatgtcagggatattctcaacgatttcttcgaaccttggaaccaacaattttttaatctgacggccgttga acagattttcatgaaaccttacacatatcaaggatctatgttctcgacaaaagtctttaaacaaggtgactttcaatgga tctga |
|
Protein
| Protein ID | pfu_aug1.0_4402.1_08888.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4402.1_08888.t1 MSVKYSPVPTNDVGELPQGWCRCQLHPNCTKRNIIALVVILSLSSVFIISACVGTSWIQNSHFCPEKPKVIPLPHSRKKG LPHYPHTQRRLPDCIIIGVRKGGTRALINYLNLHPDIVTAPEEIHFFDDQQNYSKGLSWYRRQMPYTFSDKVIIEKTPNY FVDDKVPWRIHNFSSSVKLILIVRDPLYRAVSDYTQIRERRLGQGLEMEEFEELAFNGEEEVSVDNVRTQYPAINRSLYS YHLTKWLRYFSLSQIHIVDGDNMVRDPVQEIKKVENFLSLEHKIQKDWIVFDRTKGFHCVKPDNKRYRCLNKTKGRKHPR IDPDVRDILNDFFEPWNQQFFNLTAVEQIFMKPYTYQGSMFSTKVFKQGDFQWI |
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