Gene
| Gene Model ID | pfu_aug1.0_4420.1_01723 |
|---|---|
| Locus | scaffold4420.1 : 22556 ... 35075 : - |
| To GenomeBrowser | scaffold4420.1:22556..35075 |
| Genes list of scaffold | scaffold4420.1 |
| Synonym | pfu_aug2.0_1325.1_18268 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4420.1_01723.t1 | 2 | 1 | AA_permease_2 | 7 | 245 | 2.5e-24 | 85.6 | 8.5e-28 | 2.5e-24 | 85.6 |
| pfu_aug1.0_4420.1_01723.t1 | 3 | 1 | AA_permease | 13 | 241 | 1.2e-18 | 66.7 | 3.9e-22 | 1.2e-18 | 66.7 |
| pfu_aug1.0_4420.1_01723.t1 | 3 | 2 | AA_permease | 359 | 410 | 1.2e-18 | 66.7 | 0.042 | 120.0 | 0.7 |
| pfu_aug1.0_4420.1_01723.t1 | 2 | 2 | AA_permease_2 | 388 | 438 | 2.5e-24 | 85.6 | 0.015 | 44.0 | 2.4 |
| pfu_aug1.0_4420.1_01723.t1 | 3 | 3 | AA_permease | 408 | 444 | 1.2e-18 | 66.7 | 0.42 | 1200.0 | -2.6 |
| pfu_aug1.0_4420.1_01723.t1 | 1 | 1 | AA_permease_C | 417 | 467 | 2.3e-16 | 59.3 | 7.7e-20 | 2.3e-16 | 59.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4420.1_01723.t1 | gi|291235215|ref|XP_002737540.1| | PREDICTED: high affinity cationic amino acid transporter 1-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4420.1_01723.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4420.1_01723.t1 atggacaacacatcgtctatatatctaatcggacttttcttttacaaagtaacttcagcgattgcaatcattttaacaac gctgagtgtgtttatgacattttgcatcatctgtgtcggattcttccatgtaaaacatgaaaattggaccgatccaccag ggttcttccctaatggattacaaggaactctctgcggaacatctctgctgttttatgtatttgctagtgctgacaggatt gtttgtagttcagacgaaacaaaagatcctacgaaagttgttccaacgggaatatgctttaccctcgccatgacatccat attgcttttttgtgtatcaattgcagttactttatgctttccgggaaacctctttcctgaatctgtggcactaccgatca tatttcgcaacagaggaatagagggtgcagatagtttgataactattggaggaatggtggcactgttcgttgcgtgtgtt tgcacaatgtactcgatatccagacttctgtatggaatatcttcagatggtcttctcttccatccattcaagctcgtcaa cgaattaactggaacgccaatttattcgataatatttgcatttctggtgtcagcagtggttatgctctctatgagtcttg aactacttattcttataaacagtgtatcaaccttaatatcaagcattctagtgagtatatgtgttatatgtctgcggtat cagcaagatcagatagggttgcgccaggagtatgaggaaccaagtattgaccaagcagtactatgcactgaattcgtata tgcttcctttctagcagatccaaagataaacaataacgaaacaccaatggagggaaaagaagacaaatgttgccaacaaa attctctcatgtatggttctatggaccaaaataattcattcaatcgcgcaccaaggggaagtacttaccgcaaaatggac agtatgattaataatacacctaatgggagctctagtagcctgtttcctcttccgaccaatcacacaatagacccaacgca tgcaacatggatgaaagtcaattcctcattagtggcctatacagtggctagtgttattttatcgctcatgatcgatctca atctacgccagtgttgttcatacggtccctcgtggtggcgagtcacgataatcattctatcaatagtgactctacttgtt tcattcataatcatagctcgtcaacctcagaatagagcaaagctaatatttaagacaccgtatgtaccagtagtgcctct tgtatccatattattcaatgcaattcttctcgcaacaataccatatgaagcttgggtcagatttgcagttggtttatgca caggtatagtcatctacattagttatggaatcagacacagccaggagagaaaaatagacgaacaagaagttatattgtac gaaattacagagaactga |
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Protein
| Protein ID | pfu_aug1.0_4420.1_01723.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4420.1_01723.t1 MDNTSSIYLIGLFFYKVTSAIAIILTTLSVFMTFCIICVGFFHVKHENWTDPPGFFPNGLQGTLCGTSLLFYVFASADRI VCSSDETKDPTKVVPTGICFTLAMTSILLFCVSIAVTLCFPGNLFPESVALPIIFRNRGIEGADSLITIGGMVALFVACV CTMYSISRLLYGISSDGLLFHPFKLVNELTGTPIYSIIFAFLVSAVVMLSMSLELLILINSVSTLISSILVSICVICLRY QQDQIGLRQEYEEPSIDQAVLCTEFVYASFLADPKINNNETPMEGKEDKCCQQNSLMYGSMDQNNSFNRAPRGSTYRKMD SMINNTPNGSSSSLFPLPTNHTIDPTHATWMKVNSSLVAYTVASVILSLMIDLNLRQCCSYGPSWWRVTIIILSIVTLLV SFIIIARQPQNRAKLIFKTPYVPVVPLVSILFNAILLATIPYEAWVRFAVGLCTGIVIYISYGIRHSQERKIDEQEVILY EITEN |
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