Gene
| Gene Model ID | pfu_aug1.0_44244.1_34307 |
|---|---|
| Locus | scaffold44244.1 : 1 ... 4734 : + |
| To GenomeBrowser | scaffold44244.1:1..4734 |
| Genes list of scaffold | scaffold44244.1 |
| Synonym | pfu_aug2.0_134.1_13661 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_44244.1_34307.t1 | 1 | 1 | Cyclin_C | 180 | 277 | 4.4e-21 | 75.0 | 1.6e-24 | 8.0e-21 | 74.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_44244.1_34307.t1 | gi|222617130|gb|EEE53262.1| | hypothetical protein OsJ_36196 [Oryza sativa Japonica Group] | 6.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_44244.1_34307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_44244.1_34307.t1 gtccatttgagtgagagagataccaatatattgtcctctggttacacttatcgcgtgaagaaagagcccaagaaagccaa tgtttctgtacctcgtcccctgggaacatcgggaagtagtaaggtacagaggaacaaggtggctcaggataatctaatgg ccaagaagctactacgtcatgtcacaggaaacaaactcataaagaaactagcaaagaagacattgccgtttaacgtggca aaacctgaaccatgtgctgtactagatgatgatttactacctattgataatatggacattgacatgcaatcacagattcg tactgtccagaccaaaattcctcctggaatgaaagaaatcgagaacagacttgccaatgtattttcttgccccgagtatg cccatgacatctaccaatatcttcagataaagaccctttgctttctgacagacaacaccttcactgaggaccaggtcatc ctgttagagagggtcatactacagaagatggactttgacctaaatatgccagacacctccgttttccttgatagatttct ggaaatcgaatctgattcagacaaccattcagaaatagatggcatgaccaagtacatcatagacctgaccttgacgactt tggagtttgtatactttgtgccctctgtcattgcggccagctctttatacctgacacgtaaattattgggattgtcgact gtttggacctacggcctgtcctattacacaaggtattctgaaaaagagctgcatgactgtgtgctggcgatggctagatt attgcaagaggcaccaaaagcaaaacttcaggtagctttgatctag |
|
Protein
| Protein ID | pfu_aug1.0_44244.1_34307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_44244.1_34307.t1 VHLSERDTNILSSGYTYRVKKEPKKANVSVPRPLGTSGSSKVQRNKVAQDNLMAKKLLRHVTGNKLIKKLAKKTLPFNVA KPEPCAVLDDDLLPIDNMDIDMQSQIRTVQTKIPPGMKEIENRLANVFSCPEYAHDIYQYLQIKTLCFLTDNTFTEDQVI LLERVILQKMDFDLNMPDTSVFLDRFLEIESDSDNHSEIDGMTKYIIDLTLTTLEFVYFVPSVIAASSLYLTRKLLGLST VWTYGLSYYTRYSEKELHDCVLAMARLLQEAPKAKLQVALI |
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