Gene
| Gene Model ID | pfu_aug1.0_4434.1_23570 |
|---|---|
| Locus | scaffold4434.1 : 18403 ... 22635 : - |
| To GenomeBrowser | scaffold4434.1:18403..22635 |
| Genes list of scaffold | scaffold4434.1 |
| Synonym | pfu_aug2.0_735.1_17788 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4434.1_23570.t1 | 1 | 1 | Arf | 19 | 188 | 4.0e-07 | 29.4 | 5.7e-10 | 5.2e-07 | 29.0 |
| pfu_aug1.0_4434.1_23570.t1 | 1 | 1 | Ras | 24 | 191 | 1.7e-34 | 118.5 | 2.2e-37 | 2.0e-34 | 118.3 |
| pfu_aug1.0_4434.1_23570.t1 | 1 | 1 | Miro | 24 | 137 | 5.5e-15 | 55.9 | 7.8e-18 | 7.3e-15 | 55.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4434.1_23570.t1 | gi|260667431|gb|ACX47926.1| | 1.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4434.1_23570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4434.1_23570.t1 atgtcatacgaaaatcatggagtaataagtatggctgcccgatatgagccactggagaattcatctctgaaatgtgtggt tataggagatacgggaagtggaaaaagcgcgctggctcatagaatagccgcgcaggagttcaagtccgaatctgacccga cgctcttcgacaattttgctgctacaatcacagtagatggaattccataccatttaagcatttttgacacaacaggcaag catgacatggctcgtcttcgtgctctatcttacgtcaaaagtgacgtagtcatcgtctgcttttctgtgataaatttaga aacttttaacaacgtcaaaaagttttgggtagcggaattacgtcatcacttaccaagagcgccatttctattggttggaa ctcatacagacgtacggtataatacaccagatatccagctaaccaccgattctttcgtttcgcctggccgaggatcagac tctgctttggaaataggtgctttcacttaccttgagtgttcatcgttgaccggcgatggcattgatgaactatgcaaaga aatagtagtcgccgtctcggtcaaaccaacggaaatatccaaaaaatctacttcctgttgtgcagtctcgtga |
|
Protein
| Protein ID | pfu_aug1.0_4434.1_23570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4434.1_23570.t1 MSYENHGVISMAARYEPLENSSLKCVVIGDTGSGKSALAHRIAAQEFKSESDPTLFDNFAATITVDGIPYHLSIFDTTGK HDMARLRALSYVKSDVVIVCFSVINLETFNNVKKFWVAELRHHLPRAPFLLVGTHTDVRYNTPDIQLTTDSFVSPGRGSD SALEIGAFTYLECSSLTGDGIDELCKEIVVAVSVKPTEISKKSTSCCAVS |
|