Gene
| Gene Model ID | pfu_aug1.0_444.1_50871 |
|---|---|
| Locus | scaffold444.1 : 80936 ... 85127 : + |
| To GenomeBrowser | scaffold444.1:80936..85127 |
| Genes list of scaffold | scaffold444.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_444.1_50871.t1 | 2 | 1 | BTB | 26 | 129 | 1.6e-26 | 92.4 | 3.6e-30 | 1.8e-26 | 92.2 |
| pfu_aug1.0_444.1_50871.t1 | 2 | 1 | BACK | 108 | 131 | 5.4e-30 | 103.2 | 0.2 | 970.0 | -0.4 |
| pfu_aug1.0_444.1_50871.t1 | 2 | 2 | BACK | 136 | 238 | 5.4e-30 | 103.2 | 4.6e-33 | 2.3e-29 | 101.2 |
| pfu_aug1.0_444.1_50871.t1 | 2 | 2 | BTB | 178 | 195 | 1.6e-26 | 92.4 | 0.53 | 2600.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_444.1_50871.t1 | gi|291242604|ref|XP_002741193.1| | 6.02558e-44 |
Transcript
| Transcript ID | pfu_aug1.0_444.1_50871.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_444.1_50871.t1 atggatgcagtaccagcaggtttggaagacgaatggttgttgaaatacatcaacaatttatgtgaaggtcttcttcagca gtacacgtctcagcagtacactgacgtcacaataagtgtagatgacaaagtctttcaatgtcatcgagtagtattgtcgg caatgtcgccctattttgacgccatgttttcgtcaggcatgcgtgaaacggaagaaaacattgtgacgttacagggaaca gatgcagtcacgtttgacaaaattttatcttttatctatggacgaaaatacgtcattgacgtggaatgtgtgagttctct gttacagacgagcgtaatgttgcagattaaatgtctacaagaacagtgtgaagaatttatgataagtaaagtcgatacag agaattgcataggaacatggaaactagcaaacggacatggctgtcattatcttgcacataaggcgtacaggtttatcctg cattatttcaacgacataaggaaaacggaagacttcgcagccttagatctggatgagctgttgacaatcatacaagataa tgatctcaatgtaaaacgagaagaggatgtgtgcgatgcagttttccaatggataaacttcaacaatgaacagagaacta aacatcttcctaacttggcggagaatctgagatttccgttggttcaacccgaatacctcatagaagtagtggaacgattc cccgacattttgaacgatcaaatatgcagagaagttctagaagaagccaaacggtatcatctacttcctgcaaggagaca agattttgtgtcacctcgtctagtttatc |
|
Protein
| Protein ID | pfu_aug1.0_444.1_50871.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_444.1_50871.t1 MDAVPAGLEDEWLLKYINNLCEGLLQQYTSQQYTDVTISVDDKVFQCHRVVLSAMSPYFDAMFSSGMRETEENIVTLQGT DAVTFDKILSFIYGRKYVIDVECVSSLLQTSVMLQIKCLQEQCEEFMISKVDTENCIGTWKLANGHGCHYLAHKAYRFIL HYFNDIRKTEDFAALDLDELLTIIQDNDLNVKREEDVCDAVFQWINFNNEQRTKHLPNLAENLRFPLVQPEYLIEVVERF PDILNDQICREVLEEAKRYHLLPARRQDFVSPRLVY |
|