Gene
| Gene Model ID | pfu_aug1.0_4446.1_52276 |
|---|---|
| Locus | scaffold4446.1 : 1 ... 9881 : + |
| To GenomeBrowser | scaffold4446.1:1..9881 |
| Genes list of scaffold | scaffold4446.1 |
| Synonym | pfu_aug2.0_93.1_10262 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4446.1_52276.t1 | 1 | 1 | Clat_adaptor_s | 6 | 145 | 1.6e-34 | 118.6 | 2.5e-38 | 1.9e-34 | 118.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4446.1_52276.t1 | gi|322794160|gb|EFZ17369.1| | hypothetical protein SINV_13933, partial [Solenopsis invicta] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 2 |
| 8-16cell | 2 |
| egg-Dshape | 4 |
| trochophore | 2 |
| >Adult tissues | |
| Dshape | 2 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4446.1_52276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4446.1_52276.t1 gaaccatccctgtacacagttaaagccattgccatattagataacgatggaaacagactaattacaaagtattatgatga gcagtttccctcagcaaaggagcagaaacagtttgaaaagaatctattcaacaaaacacacagagctaattctgaaatca ttatgtttgagggattaacgtgtgtctacaaaagtaacgtggaccttttcttttatgttataggaagctcacaagaaaat gaacttattttagccagtgttttaaatgccttgtacgactctgtgagtcagatattgaggaagaatgtagaaaaacgagc attactggagaatcttgatgcagtgttcctagccgtagatgaaatatgtgacggggggattatattagattcagattcat caagtatcgtacagaaagtggcggtacggaatgacgacatacctttgggagaacagactgtagcacaggtgttacaaagt gcaaaagagcagataaagtggtcattactaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_4446.1_52276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4446.1_52276.t1 EPSLYTVKAIAILDNDGNRLITKYYDEQFPSAKEQKQFEKNLFNKTHRANSEIIMFEGLTCVYKSNVDLFFYVIGSSQEN ELILASVLNALYDSVSQILRKNVEKRALLENLDAVFLAVDEICDGGIILDSDSSSIVQKVAVRNDDIPLGEQTVAQVLQS AKEQIKWSLLK |
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