Gene
| Gene Model ID | pfu_aug1.0_4448.1_37885 |
|---|---|
| Locus | scaffold4448.1 : 1 ... 21185 : - |
| To GenomeBrowser | scaffold4448.1:1..21185 |
| Genes list of scaffold | scaffold4448.1 |
| Synonym | pfu_aug2.0_1719.1_31863 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4448.1_37885.t1 | 4 | 1 | Motile_Sperm | 57 | 105 | 4.5e-09 | 35.9 | 0.00058 | 8.6 | 6.0 |
| pfu_aug1.0_4448.1_37885.t1 | 4 | 2 | Motile_Sperm | 163 | 224 | 4.5e-09 | 35.9 | 1.8e-06 | 0.027 | 14.1 |
| pfu_aug1.0_4448.1_37885.t1 | 4 | 3 | Motile_Sperm | 390 | 420 | 4.5e-09 | 35.9 | 0.00023 | 3.4 | 7.3 |
| pfu_aug1.0_4448.1_37885.t1 | 4 | 4 | Motile_Sperm | 641 | 669 | 4.5e-09 | 35.9 | 0.0067 | 99.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4448.1_37885.t1 | gi|291236276|ref|XP_002738067.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4448.1_37885.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4448.1_37885.t1 atgaaaactgaggagaaagaagatagcaacttgatagaacagctaccaatggatgaatacttcaatgatggattccacag tgatgtcatcaattttgttccccacgtcagtttggaatcgaatattgtagattttggtcaatgcccaaacctcagagtca tcgaagataaaatgattaacataaccaatcacaccaagggtaagatcaccatacaatggatgggaggtaacgatcggata ttttctgtcatgccgctaacgatggacatcccaccaatgaagtccggagccttccaagtctcgtttagacccaatgcacc aaatcagtttttcggagcagaattagagtgctatgccttctacaagagtttacgtgaccatcgccttgttgaggataaca cacactgtccaccatggtgcctgaaccttacctgtacaggtcatacattcctacccaacaatgagacttttctcccgaga tcgttgtttgactctgagagagttgtcttccctgctgtcaacacaaaagaatctacatacaggaccgtgttgtttacaaa cacagggagcacaccaattctattcgatataaagccagacgagactcattcgtttgccgtgaagccacagaaagccctac tgaaggacgaacatcagatttttgtcgttaagataacgccaacggaagtgaagcattacaaccacgagctcaagttccgc ctcaatgataacgacaaatatgacaaggtagcaaaacttcttactgaatatcataattattgtgttcctggatatgaagt tcanatatcagtaaatatgataagcattacaattagacagaatgtcaggtatcctcccagcgaggtcgtgccagcaaatc ctagcgacggtaaaaccgttaagacgagtcacatatcagtttgccatctcctaccaacttcttactccggaggccatgcc agacgtccccctgtatatacccgagccatcttggatttcaacttcagtgccgcgcccctcggtagtgagccttgtgtcgt cagcctgatgttcgaaaatactggcacagtcgccacagaatggtcattcctgttccccagtgacctacaattagagctgg aatactgggctgaaactggtgaatttgatgaagatgaacttcatgagatgaaagttatggacaacaagttgtttgacatc gagcccaaacagggacaacttgctccgggagagtgtaaaactgtcacttttacatacagacacactatgtctgggacgga cagactgccagtcttactaaaactggctagaggcagagaaattctgttgaacttcgtaggcgtgactgtcgagccagaca gacggtatatacatttcccgtccagtaagcacatgtttacacccgtacctgtcggagagaagatcagcccaaaacaagtg tacgagctttataacggaggggccgagtctgtcaaatttaactttgatctggcgccattggaaatcttacgtcaggagaa ctttgaccagccgatcttcgagtgtttgacgccggttggtgagattccacccggacgtacaatgtccgtagaatggagat tctctccagtggaagccaagacatacatggtggatgtaccaatccacgtacataacggagacactgcgatcgtgactttt actggcgtaggttatgataagcgtgtgatgggcgacacaatgccgattcaggaacaacaagacatgacgggagtacccgg tatacaaagcgtccccgtccccggccagctggcttacttgtcacaggaacgtctatcgtttggaaaccttcctttattca gcagggcacgtcgtatggtgttcgttactaatcgatcacgggaacgggaagtgtcctttgaatggcatgtgacaacacag tctgatgcacagtacctgtccgtttctcctataagaggacgtcttgctcccggagaaagccgtatgtgtcgtgtggtatt tatagcctgtggaatgccgtccttctatgaccttgacctggtttgtgaaaccacggatgaatatgagatggacatataca aagagaaactacaagcttgggaagacgagaagtatcgtcagacgtacgagtttaatatcacagagcacgatctcgatgct gataaacggctaacatcagctgtggaggtcacgaaaaagagcccaccctcctctgccggcagtacgaagggcaaaaagaa atccaagaagtccaagaccccaccccgacatacccaggaggagattgagcgagtcagaaatcaggaacagaggcttaaag ataaacaaaaccttaaaaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_4448.1_37885.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4448.1_37885.t1 MKTEEKEDSNLIEQLPMDEYFNDGFHSDVINFVPHVSLESNIVDFGQCPNLRVIEDKMINITNHTKGKITIQWMGGNDRI FSVMPLTMDIPPMKSGAFQVSFRPNAPNQFFGAELECYAFYKSLRDHRLVEDNTHCPPWCLNLTCTGHTFLPNNETFLPR SLFDSERVVFPAVNTKESTYRTVLFTNTGSTPILFDIKPDETHSFAVKPQKALLKDEHQIFVVKITPTEVKHYNHELKFR LNDNDKYDKVAKLLTEYHNYCVPGYEVXISVNMISITIRQNVRYPPSEVVPANPSDGKTVKTSHISVCHLLPTSYSGGHA RRPPVYTRAILDFNFSAAPLGSEPCVVSLMFENTGTVATEWSFLFPSDLQLELEYWAETGEFDEDELHEMKVMDNKLFDI EPKQGQLAPGECKTVTFTYRHTMSGTDRLPVLLKLARGREILLNFVGVTVEPDRRYIHFPSSKHMFTPVPVGEKISPKQV YELYNGGAESVKFNFDLAPLEILRQENFDQPIFECLTPVGEIPPGRTMSVEWRFSPVEAKTYMVDVPIHVHNGDTAIVTF TGVGYDKRVMGDTMPIQEQQDMTGVPGIQSVPVPGQLAYLSQERLSFGNLPLFSRARRMVFVTNRSREREVSFEWHVTTQ SDAQYLSVSPIRGRLAPGESRMCRVVFIACGMPSFYDLDLVCETTDEYEMDIYKEKLQAWEDEKYRQTYEFNITEHDLDA DKRLTSAVEVTKKSPPSSAGSTKGKKKSKKSKTPPRHTQEEIERVRNQEQRLKDKQNLKK |
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