Gene
| Gene Model ID | pfu_aug1.0_4452.1_23577 |
|---|---|
| Locus | scaffold4452.1 : 1 ... 10186 : + |
| To GenomeBrowser | scaffold4452.1:1..10186 |
| Genes list of scaffold | scaffold4452.1 |
| Synonym | pfu_aug2.0_426.1_20759 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | latrophilin 3-like |
| Description | Homology (29%) to ref|XP_002733569.1| PREDICTED: latrophilin 3-like [Saccoglossus kowalevskii] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4452.1_23577.t1 | 1 | 1 | GPS | 248 | 294 | 1.1e-11 | 44.6 | 3.4e-15 | 1.7e-11 | 44.0 |
| pfu_aug1.0_4452.1_23577.t1 | 1 | 1 | 7tm_2 | 326 | 532 | 3.09995e-41 | 141.0 | 3.60134e-43 | 1.8e-39 | 135.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4452.1_23577.t1 | gi|291227191|ref|XP_002733569.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4452.1_23577.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4452.1_23577.t1 ataaatcaatgaatgccgatgccatggcggaggctctgtataacatatccctgggggctagggatctgacagtggaggaa ttaaggagaatcatcgtgatactggagtccctggtagctttgaagggatccctgctccaggggcggagacagtatcatat ggtaggggtgctcagtaacctgtattataccagggaacgggtcctactggatggagaaatcaagtataggacatcgtcaa gataccttaaaatagtgaacaagttgatagatgagacggacatagcggatggtgacatgatggttatacaccctaacact ggtctgttgtcagttaatgtcaacatcaataattataatggtacactgttatctgtcaagtcctcatccaccgaatcatt gtcaaaatctatgatacgagttgacggagacaaaaatatcaagttacaaggcgcgtcagccgtgaatatccctccctctg caattatggaagcaaagccggtatcaaataagaatccgaatgataaaagagttgccctggctattcacaaagactcaacc attatagagccaatcagacgagctagggggccatgggcattgatgaaggaatcccgtataaaagctgcccgtcagcgcgt ggttaacagcgccattttcaatgtacgggtacccggatatcaggtgtcaaatctcactgatcccgtcaaattcagattcc aacctataactgagaatggggacaatgcctcgtgtgaatttttcgtcgatcctgaatccatggcgggcggctggtcacgt gccggatgtcatgtgacgtcactcaagaaaggagaatatgtggaatgttcctgcaatcaccttacaaacttcgcactcat aatggatgtgtatggtgttggagagaagctaagcgttacccataggagagccatgtcgtacatatcatacctcggttgtg cgctgtctctccttgcactcctactcaccctccttacctacatgatgtttagtatagcagcatctaacatagtgttcttg attggtgaacaggaatatagtctacaagacgaaactggatgcaagattgtagcagcacttttacatttctgcctcctgtg ttctataagttggatgtcaatagagggattctacatgtacaaagctctggttaaagtcttcaacactcacttctcatact tcttacttaaaacatgccttgttggatacggtgtacctctcctaattgtaatcatcacagcaggtgtcaataaaaccagt aactatggttaccagccaggtgacatctgctggctgtcaacaaatgcctttttcggagcatttctggcccctgtgtgtgc catgttgattttcaacttcatagtctttgttcttgtcttgagaaaaataatggggaattctggtaaaaagttaaataaat ctgacaagactagaacttcacagcgcttgcgcagagcattcactttggtgtcactgttcggactaacgtggacttttgct gtattcgccacggacggagcaggaattattttccaataccttttcgctatttcaaattcacttcaaggatttttcatttt cattttcaacatattactgaacaaagcagccattttacaatggaagatgaagcttcttggtcgtggtgaggaggtgtcca aactgacatcaagaaaagaatccaccacaagagaaactatttcatga |
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Protein
| Protein ID | pfu_aug1.0_4452.1_23577.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4452.1_23577.t1 KSMNADAMAEALYNISLGARDLTVEELRRIIVILESLVALKGSLLQGRRQYHMVGVLSNLYYTRERVLLDGEIKYRTSSR YLKIVNKLIDETDIADGDMMVIHPNTGLLSVNVNINNYNGTLLSVKSSSTESLSKSMIRVDGDKNIKLQGASAVNIPPSA IMEAKPVSNKNPNDKRVALAIHKDSTIIEPIRRARGPWALMKESRIKAARQRVVNSAIFNVRVPGYQVSNLTDPVKFRFQ PITENGDNASCEFFVDPESMAGGWSRAGCHVTSLKKGEYVECSCNHLTNFALIMDVYGVGEKLSVTHRRAMSYISYLGCA LSLLALLLTLLTYMMFSIAASNIVFLIGEQEYSLQDETGCKIVAALLHFCLLCSISWMSIEGFYMYKALVKVFNTHFSYF LLKTCLVGYGVPLLIVIITAGVNKTSNYGYQPGDICWLSTNAFFGAFLAPVCAMLIFNFIVFVLVLRKIMGNSGKKLNKS DKTRTSQRLRRAFTLVSLFGLTWTFAVFATDGAGIIFQYLFAISNSLQGFFIFIFNILLNKAAILQWKMKLLGRGEEVSK LTSRKESTTRETIS |
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