Gene
| Gene Model ID | pfu_aug1.0_4452.1_23580 |
|---|---|
| Locus | scaffold4452.1 : 31916 ... 44812 : + |
| To GenomeBrowser | scaffold4452.1:31916..44812 |
| Genes list of scaffold | scaffold4452.1 |
| Synonym | pfu_aug2.0_426.1_20756 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4452.1_23580.t1 | 2 | 1 | Jnk-SapK_ap_N | 24 | 172 | 7.9e-14 | 51.9 | 1.6e-17 | 7.9e-14 | 51.9 |
| pfu_aug1.0_4452.1_23580.t1 | 1 | 1 | RILP | 236 | 266 | 6.4e-10 | 39.0 | 1.3e-13 | 6.4e-10 | 39.0 |
| pfu_aug1.0_4452.1_23580.t1 | 2 | 2 | Jnk-SapK_ap_N | 246 | 263 | 7.9e-14 | 51.9 | 0.17 | 820.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4452.1_23580.t1 | gi|328713432|ref|XP_003245071.1| | PREDICTED: RILP-like protein homolog isoform X2 [Acyrthosiphon pisum] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_4452.1_23580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4452.1_23580.t1 atggatccgtacaaagaaaggcgcgatatcatggacgaagacttactagaggttgtgtcagtggttgatgtgtacgatca agcagcagagattgggaaagagtttgaaaaactgatagagggacatggagttgaggcagtaacggatttgatgccaaaag tgataaaatctttagaacaattagagcttctggccagcaagtatgaaaaagaaagtagtgaaataaatgaacttcgttca atgatagagaaacttgagacagaaaagaatgaacgagctcaagaaaggttgcgttatgaggaggaacttctacaaatcga ggagaactggcagagggaaacacgggagttggtgaaatcgcttcaagctcagctggatcagatcgtgaaagttaactcag agttaaggcggaataacagtatacaacgtaaacaaaaccaccatctgatagaggagaaaagtgacctggaagctagacta gccgataaagagcaacaaatcacaaaaataaccgagttaatcgaggaacaggagaaaaagacagagaaagtcgaaaatgt tactgctgcttctaatgtgatgcaaagtctacctnaaggagctcacagagaggaggagggtgaaaacatggctcatatcg agcagacacttagtactgtagggaaaatggttatagacatgaaggatcctaaccgaccacggtttacaatgaacgaactg aggacggttatcatggagaggaatgaacttaaaaataaactacacgaagtagaggaggaactcacgacgtatcgcccacc gtaa |
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Protein
| Protein ID | pfu_aug1.0_4452.1_23580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4452.1_23580.t1 MDPYKERRDIMDEDLLEVVSVVDVYDQAAEIGKEFEKLIEGHGVEAVTDLMPKVIKSLEQLELLASKYEKESSEINELRS MIEKLETEKNERAQERLRYEEELLQIEENWQRETRELVKSLQAQLDQIVKVNSELRRNNSIQRKQNHHLIEEKSDLEARL ADKEQQITKITELIEEQEKKTEKVENVTAASNVMQSLPXGAHREEEGENMAHIEQTLSTVGKMVIDMKDPNRPRFTMNEL RTVIMERNELKNKLHEVEEELTTYRPP |
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