Gene
| Gene Model ID | pfu_aug1.0_4452.1_23581 |
|---|---|
| Locus | scaffold4452.1 : 49544 ... 55953 : - |
| To GenomeBrowser | scaffold4452.1:49544..55953 |
| Genes list of scaffold | scaffold4452.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4452.1_23581.t1 | 3 | 1 | SpoU_methylase | 20 | 108 | 3.4e-13 | 49.6 | 1.1e-15 | 7.8e-12 | 45.2 |
| pfu_aug1.0_4452.1_23581.t1 | 3 | 2 | SpoU_methylase | 170 | 187 | 3.4e-13 | 49.6 | 0.24 | 1800.0 | -1.3 |
| pfu_aug1.0_4452.1_23581.t1 | 3 | 3 | SpoU_methylase | 196 | 220 | 3.4e-13 | 49.6 | 0.039 | 290.0 | 1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4452.1_23581.t1 | gi|322797134|gb|EFZ19388.1| | hypothetical protein SINV_11142, partial [Solenopsis invicta] | 2.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_4452.1_23581.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4452.1_23581.t1 gaattttccgaattccgaaaacaggagagtgtcctagtatgccaaaagaggtgctgccacttacagttgtactagacaac atcaaggactccatggacattggcatgcttatacgttccatatctgcggtgggagcacagagactgatcgtacttaaaga ttgtgttgatatttgggataaatcagcaataagatctgcctggggaggacacttcagagttcctttgtacacagatgtgg aatggcatgaattacagaactacatccagattgatggaaatgccacgtttctgacatcgtccagaagtagtatactcaag aaactccagagagagatcgattcgaaaacgccagaacaattagatgagatcattgatagcctagaaactgacgataattt agatgaagatgaagatgacaatgatggtgatgatgttgacaatgaaaagttttcagtagctcctatttttagcaaattat tttacagtgttgattatagtcagttttcacatgtgactcttgttataacaggtgagaagtataatataggtgctcagtgt cgtaagtttctgtttaggaacaatggtcaaggcgtttccttgccgatggccgacaatgcaaagggagttaactcagctgt aggtggcagtgttgttctttatgaaattcaaagacagtttgcagaaaaaagaaaaacagattgtgaataa |
|
Protein
| Protein ID | pfu_aug1.0_4452.1_23581.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4452.1_23581.t1 IFRIPKTGECPSMPKEVLPLTVVLDNIKDSMDIGMLIRSISAVGAQRLIVLKDCVDIWDKSAIRSAWGGHFRVPLYTDVE WHELQNYIQIDGNATFLTSSRSSILKKLQREIDSKTPEQLDEIIDSLETDDNLDEDEDDNDGDDVDNEKFSVAPIFSKLF YSVDYSQFSHVTLVITGEKYNIGAQCRKFLFRNNGQGVSLPMADNAKGVNSAVGGSVVLYEIQRQFAEKRKTDCE |
|