Gene
| Gene Model ID | pfu_aug1.0_446.1_29257 |
|---|---|
| Locus | scaffold446.1 : 889 ... 14515 : - |
| To GenomeBrowser | scaffold446.1:889..14515 |
| Genes list of scaffold | scaffold446.1 |
| Synonym | pfu_aug2.0_2908.1_28981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_446.1_29257.t1 | 1 | 1 | PINIT | 99 | 173 | 1.2e-10 | 41.6 | 9.3e-14 | 2.3e-10 | 40.7 |
| pfu_aug1.0_446.1_29257.t1 | 1 | 1 | zf-MIZ | 181 | 229 | 2.5e-21 | 74.9 | 1.8e-24 | 4.6e-21 | 74.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_446.1_29257.t1 | gi|242000044|ref|XP_002434665.1| | sumo ligase, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_446.1_29257.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_446.1_29257.t1 atggtgatgagctttcgtgtgtctgagctacaagtattactgggatatgtgggatgtaacaaaacaggcagaaaaacaga acttttacaaagagcgctcaaactagtcgcaagaggctgctctgtacctgtacagataaaaatcagagaactttacaagc gaaaaccaacaggaaagccaggagaagatggaccaatgggatttgaaaaggacacttgtaatgaaaaaagtgcattggat tactccaatccaatgggtgcggactcgctgagccatgtgggagctatgggtttacctgtacaccctgatgtcaagatgaa gctcctaccgttctatgattgtctctcagaactcatgaaaatcacaagtttagctccaagaggatcaaataagttccagg agaatagtttcagctttcatctcacaccacaacaagctcaggacatagctatgtcaagatatataaaattgaatatattt acagtaaaggagaagttgtcacatgatgcagacagtgagatagctactaccagtttgagggtctccttaatatgtcctct tggtaagatgcgaatctcaattccgtcaaggtctagtacatgtacacatctacagtgcttcgatgcctctacgttcctaa tgatgaacgagaagaagtccacttggatatgtcctgtctgcgataaacaagctccatttcataaactatttatagatggc ttatttgtggagattttacgacaatcaccagacacaaacgacatcaaattccatgaagacggaagttggagtccacttaa gtcagcaaaggagacacacgtcatatcctgtagtcccatggcaagcactagtaagactcggcctgagacctctacatcat caggagcttcacctgcaaagaagccgaagatggaagtgatagatttgacattaagttctgacgaggaggattcagacagt gacactgagtgtgatagtccgctgcctgcatctacagcattagataacagtcctgccatcattaatctggactcacctaa tcctgcaccctcatcggtatcattatctaattctccaatggtcgcttctccatcttccaattcaaactcatcgaattcat catcgtcatcttcaaattcatctgcacattcatctcctgcttcagtacgacgtaaatctcccagttcatctgcccctgcc tcagccccgggccccgcctcgacaggcatgcttaactctccccgatcggtagcatctttatccccctcgggccctgttcc gccccctcctctgaatccaggtctgatcagtttaagtgtgaattctcctctctctattcctgcctctccggtccactccc cagcgtctccccttcggtctccgttaggagcgaggatttctcctgtgactccgcctacgacaacgcccatattgcctcct tttcagccaatcactacagcaggtactctctctgtacctcacccagcttttactccttatccctcaatgcccagttttga gcctactctagacagagaaattgaagattttctgaggggtatagtatgggatcagtacagatga |
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Protein
| Protein ID | pfu_aug1.0_446.1_29257.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_446.1_29257.t1 MVMSFRVSELQVLLGYVGCNKTGRKTELLQRALKLVARGCSVPVQIKIRELYKRKPTGKPGEDGPMGFEKDTCNEKSALD YSNPMGADSLSHVGAMGLPVHPDVKMKLLPFYDCLSELMKITSLAPRGSNKFQENSFSFHLTPQQAQDIAMSRYIKLNIF TVKEKLSHDADSEIATTSLRVSLICPLGKMRISIPSRSSTCTHLQCFDASTFLMMNEKKSTWICPVCDKQAPFHKLFIDG LFVEILRQSPDTNDIKFHEDGSWSPLKSAKETHVISCSPMASTSKTRPETSTSSGASPAKKPKMEVIDLTLSSDEEDSDS DTECDSPLPASTALDNSPAIINLDSPNPAPSSVSLSNSPMVASPSSNSNSSNSSSSSSNSSAHSSPASVRRKSPSSSAPA SAPGPASTGMLNSPRSVASLSPSGPVPPPPLNPGLISLSVNSPLSIPASPVHSPASPLRSPLGARISPVTPPTTTPILPP FQPITTAGTLSVPHPAFTPYPSMPSFEPTLDREIEDFLRGIVWDQYR |
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