Gene
| Gene Model ID | pfu_aug1.0_447.1_29266 |
|---|---|
| Locus | scaffold447.1 : 31516 ... 50205 : - |
| To GenomeBrowser | scaffold447.1:31516..50205 |
| Genes list of scaffold | scaffold447.1 |
| Synonym | pfu_aug2.0_1269.1_31580 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_447.1_29266.t1 | 2 | 1 | PCI | 183 | 218 | 1.5e-19 | 70.1 | 0.39 | 1900.0 | -0.9 |
| pfu_aug1.0_447.1_29266.t1 | 2 | 2 | PCI | 269 | 364 | 1.5e-19 | 70.1 | 1.2e-22 | 5.8e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_447.1_29266.t1 | gi|307172336|gb|EFN63824.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_447.1_29266.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_447.1_29266.t1 atggcttccaatgtgcgacagcaactgtcacaactggcaactctgtctcattctggtggttctcacaaggaagtgacaga aaaatataaagggattttggagggaatactgaagtcaggaggcagtgatttagtagcaagcctgcaagcttttgttgaag cattggtaaatgagaatgtcagccttgtcatatcccgacaactcctcacagatttctgctcacatctaccaaagttagat gatgttgtggccaaacaaatcgctcattttacactggagaaagttcacacaagggtcatttcctttgaggagcaggtggc cgccattagacagcatctggctgatatttatgagagagaacagtcgtttagggaggctgctaatgtactggtggggatac cactagagacaggacagaaacagtatcccactgactacaagttagagacatacctaaaaatagctcgtctgtatctagaa gaggatcccatccaggctgaggcttatataaatagagcgtcacttctacaggccgactccaaaaatgaggaacttcagat acattacaaggcttgttatgcccgtgtcttggattatagaaggaagtttattgaggctgcacagagatataatgaacttt catacaaaaatatcatagcagatgcggagaggatgacagccctaaaaaacgccctgatctgtacagttttagcttctgct ggtcagcaaagatcaaggatgctagccacattattcaaagacgagcgatgtcagcaactaccagcttataatattttaga gaaaatgtacttagacaggataatcagaagtagtgatctacaagaattctctgcccttctccagccacatcagaaagctg ttacatcagatggttccaccatacttgatagagctgtaatagagcataaccttctctctgccagtaaactatataataat atctcatttgaggaacttggctcacttctggaaattcctccttcaaaggcagaaaagattgcatcacaaatgataacaga aggtagaatgaatggctgtatagatcaaattgactccatagttcactttgaagcaagagaagccttaccaacgtgggaca agcaaattcagagtctctgtttccaagtcaataacattattgaaaaaatatcccaccatgcaccagaatggatgaaccgg acaattgaagctcagatggccgagacgtga |
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Protein
| Protein ID | pfu_aug1.0_447.1_29266.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_447.1_29266.t1 MASNVRQQLSQLATLSHSGGSHKEVTEKYKGILEGILKSGGSDLVASLQAFVEALVNENVSLVISRQLLTDFCSHLPKLD DVVAKQIAHFTLEKVHTRVISFEEQVAAIRQHLADIYEREQSFREAANVLVGIPLETGQKQYPTDYKLETYLKIARLYLE EDPIQAEAYINRASLLQADSKNEELQIHYKACYARVLDYRRKFIEAAQRYNELSYKNIIADAERMTALKNALICTVLASA GQQRSRMLATLFKDERCQQLPAYNILEKMYLDRIIRSSDLQEFSALLQPHQKAVTSDGSTILDRAVIEHNLLSASKLYNN ISFEELGSLLEIPPSKAEKIASQMITEGRMNGCIDQIDSIVHFEAREALPTWDKQIQSLCFQVNNIIEKISHHAPEWMNR TIEAQMAET |
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