Gene
| Gene Model ID | pfu_aug1.0_447.1_29267 |
|---|---|
| Locus | scaffold447.1 : 64516 ... 81865 : + |
| To GenomeBrowser | scaffold447.1:64516..81865 |
| Genes list of scaffold | scaffold447.1 |
| Synonym | pfu_aug2.0_2993.1_12341 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_447.1_29267.t1 | 1 | 1 | TCR | 309 | 336 | 6.5e-06 | 25.9 | 1.4e-09 | 1.0e-05 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_447.1_29267.t1 | gi|118404776|ref|NP_001072590.1| | protein lin-54 homolog [Xenopus (Silurana) tropicalis] | 1.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_447.1_29267.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_447.1_29267.t1 atggaatcccagaacactgaactaatacagaatttttacctaaaatatgggtggaaagtttcctggaaaatcattgattc tcggacgagaagcattgggaatgaggagacgttgaaagtgattgccgtagacgtacactctggtgaagttgtatctcaac ccggaacaaacatagacaactctgctactaacagtaataggagtattaacttcttggatgtacccatatctgtcaactta aacaacaagtcagagggattaaatagtgttggatatcaggagaccataataggtgttagtgattcttcaaatgggacaaa cagtactgcttctgtgaattcggaacaagctaattctacaagtgctacaacaactgtgatactggcaaaaacagtcccca gtagtactaatgatctacgaactgtgaatagtaacaatgaaattgcctccacttctcagtctctcaaacgacaactttca tctccctcaagtcctatcatacataaagtcattataacaaaaaatcctaattcatcgcaaccacaggtgaaatcaaagcc tggtacagttaaccagcctgtacagaggattatattaccagctgcccccaatcagatccgagcggctacggctgtcagcc aggtgttaacgacaacgacgcttgctcagatccgacccagtgtaccgtcagttacctctctcccagcaggggctacgata ctggcttcgggaggaagtggtggtacagtacaaagctttgctcttgttccagcgtcttatgtagctcagttgacccagct tcaaagtaaaccccagcagactatggtacaacaaccagtgcccattcagcaagcccctccccagcccattcaggctcgac aagatttcatacccatcattagtaatgacacggctactagtgctaatcaaagatattgtgactgttttgctaatggtgaa ttttgccataattgtaactgtaataattgtgccaataacttggaacatgaagaggaaagatctagggcgatcaaatcttg tttagacagaaatcccatggcatttcacccaaagattgctaatggaataatgttttctcccattcctcatttacctggaa attttgaaaagggaatgaggatatga |
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Protein
| Protein ID | pfu_aug1.0_447.1_29267.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_447.1_29267.t1 MESQNTELIQNFYLKYGWKVSWKIIDSRTRSIGNEETLKVIAVDVHSGEVVSQPGTNIDNSATNSNRSINFLDVPISVNL NNKSEGLNSVGYQETIIGVSDSSNGTNSTASVNSEQANSTSATTTVILAKTVPSSTNDLRTVNSNNEIASTSQSLKRQLS SPSSPIIHKVIITKNPNSSQPQVKSKPGTVNQPVQRIILPAAPNQIRAATAVSQVLTTTTLAQIRPSVPSVTSLPAGATI LASGGSGGTVQSFALVPASYVAQLTQLQSKPQQTMVQQPVPIQQAPPQPIQARQDFIPIISNDTATSANQRYCDCFANGE FCHNCNCNNCANNLEHEEERSRAIKSCLDRNPMAFHPKIANGIMFSPIPHLPGNFEKGMRI |
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