Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_44707.1_05306
Locus scaffold44707.1 : 3106 ... 4379 : +
To GenomeBrowser scaffold44707.1:3106..4379
Genes list of scaffold scaffold44707.1
Synonym pfu_aug2.0_1460.1_01640

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_44707.1_05306.t1 gi|321456013|gb|EFX67131.1| hypothetical protein DAPPUDRAFT_262091 [Daphnia pulex] 4.0e-25

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
egg-4cell 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_44707.1_05306.t1
Definition-
>pfu_aug1.0_44707.1_05306.t1
atgcgtacggtgggacgcaaagatcaagaatcaatgggtcctgggcgatttttatgcgtcagagacgcaggacgcagaga
cacctcatactggatcaagttcttcacagactgtggaattcctgcaggggaggctacaaattacgccatcgtgttcacgg
acaataggattcagaaggatatgctgcttgacttaacaaaggaatatctgtcggaaatgggcatcaaaatactcggagat
gtcattgctatcctcaaacatgcaaaggaagttcactctcagcttgcaagggaaaaagtattaaaaggatcttcaaggac
agcttcacctgtaccaactccaaggcgttcaacaggttag

Protein
Protein IDpfu_aug1.0_44707.1_05306.t1
Definition-
>pfu_aug1.0_44707.1_05306.t1
MRTVGRKDQESMGPGRFLCVRDAGRRDTSYWIKFFTDCGIPAGEATNYAIVFTDNRIQKDMLLDLTKEYLSEMGIKILGD
VIAILKHAKEVHSQLAREKVLKGSSRTASPVPTPRRSTG

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