Gene
| Gene Model ID | pfu_aug1.0_44738.1_63197 |
|---|---|
| Locus | scaffold44738.1 : 1 ... 4541 : + |
| To GenomeBrowser | scaffold44738.1:1..4541 |
| Genes list of scaffold | scaffold44738.1 |
| Synonym | pfu_aug2.0_193.1_10415 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_44738.1_63197.t1 | 1 | 1 | IF-2B | 2 | 71 | 4.0e-13 | 49.0 | 3.0e-17 | 4.4e-13 | 48.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_44738.1_63197.t1 | gi|260811594|ref|XP_002600507.1| | hypothetical protein BRAFLDRAFT_276696 [Branchiostoma floridae] | 3.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_44738.1_63197.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_44738.1_63197.t1 cttatagtgtgtgctgccatgttcaagctctcccccaagtacctgtgttcatatgatcaggatgccttcaataagtttgt gagtccacaagatgtgatggatttttctgagggggaaattctctccaaagtacaaatagacagccctgtctttgactatg tccctccagaactggtcactctctatgtgtcaaatataggtgggaatgcaccatcatacgtgtacagacttctcagtgaa ctctaccacccagaggatcatgatctgggatctaactcaattaaatag |
|
Protein
| Protein ID | pfu_aug1.0_44738.1_63197.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_44738.1_63197.t1 LIVCAAMFKLSPKYLCSYDQDAFNKFVSPQDVMDFSEGEILSKVQIDSPVFDYVPPELVTLYVSNIGGNAPSYVYRLLSE LYHPEDHDLGSNSIK |
|