Gene
| Gene Model ID | pfu_aug1.0_4475.1_59525 |
|---|---|
| Locus | scaffold4475.1 : 22306 ... 41617 : + |
| To GenomeBrowser | scaffold4475.1:22306..41617 |
| Genes list of scaffold | scaffold4475.1 |
| Synonym | pfu_aug2.0_107.1_23474 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | serine/threonine-protein kinase |
| Description | NCBI BlastP top hit to Acromyrmex echinatior putative serine/threonine-protein kinase C05D10.2 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4475.1_59525.t1 | 2 | 1 | Pkinase | 26 | 128 | 3.5e-33 | 114.8 | 7.6e-32 | 3.8e-28 | 98.3 |
| pfu_aug1.0_4475.1_59525.t1 | 1 | 1 | Pkinase_Tyr | 29 | 131 | 5.8e-14 | 51.7 | 1.9e-17 | 9.3e-14 | 51.1 |
| pfu_aug1.0_4475.1_59525.t1 | 2 | 2 | Pkinase | 140 | 170 | 3.5e-33 | 114.8 | 1.5e-06 | 0.0072 | 15.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4475.1_59525.t1 | gi|332022413|gb|EGI62721.1| | Putative serine/threonine-protein kinase C05D10.2, partial [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4475.1_59525.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4475.1_59525.t1 atgaatgacataactgttcttattgatcttgtatttcgagatactgatgaactaaggagatttgatctcatttttacaga aacagatttacataacgtaatcaaacgaggaagtatactgaaggatgtacataaacgctatattatgtatcagatgttca aagccactaagtacctccattctggcaatgtgatacacagagatcagaagccatctaatatactgctggacagtgagtgt gtagttaaggtgtgtgactttggtttagcgagatcattaacacagataggagtggacgcggagacgggtgacccaaacct gacagaatatgtagccacacgctggtacagggcaccagaaatacttctgggatctcatagatcaaagaagtctatagagg acttgttacctgatgcccctaaggacggtgttgacctgttacggaggttgatacagtttaatcctgacaaacgaatcacc gcagatgaggctttaagacatccttttgtatcaaggtttcacaatgctgcagaggagatatcattgaactatgatgttgt acctccactaagtgacgatgtacaactaacagtagaagaatacagaaataaattatatgaggttccaggacagcgtcctg tatcagccacatcagctcagaaacaaaaaccaatctacggccgtaaacagttcaacaatgcaataaacaacccatcacat ggtgcccctaaagcttactttggtagctacactcagaatgtagggacaatttcatcgtctgccttagcttctatacaagg taaaaagtcgtga |
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Protein
| Protein ID | pfu_aug1.0_4475.1_59525.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4475.1_59525.t1 MNDITVLIDLVFRDTDELRRFDLIFTETDLHNVIKRGSILKDVHKRYIMYQMFKATKYLHSGNVIHRDQKPSNILLDSEC VVKVCDFGLARSLTQIGVDAETGDPNLTEYVATRWYRAPEILLGSHRSKKSIEDLLPDAPKDGVDLLRRLIQFNPDKRIT ADEALRHPFVSRFHNAAEEISLNYDVVPPLSDDVQLTVEEYRNKLYEVPGQRPVSATSAQKQKPIYGRKQFNNAINNPSH GAPKAYFGSYTQNVGTISSSALASIQGKKS |
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