Gene
| Gene Model ID | pfu_aug1.0_44781.1_34318 |
|---|---|
| Locus | scaffold44781.1 : 24 ... 4641 : + |
| To GenomeBrowser | scaffold44781.1:24..4641 |
| Genes list of scaffold | scaffold44781.1 |
| Synonym | pfu_aug2.0_1557.1_25002 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_44781.1_34318.t1 | 2 | 1 | EF-hand_7 | 19 | 75 | 1.3e-18 | 66.8 | 3.5e-10 | 4.7e-07 | 29.8 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 1 | EF-hand_6 | 19 | 42 | 7.5e-14 | 50.3 | 1.9e-05 | 0.026 | 14.3 |
| pfu_aug1.0_44781.1_34318.t1 | 3 | 1 | EF-hand_1 | 19 | 42 | 3.0e-13 | 47.9 | 7.8e-06 | 0.011 | 15.0 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 1 | EF-hand_8 | 19 | 38 | 3.4e-10 | 39.3 | 0.036 | 49.0 | 3.6 |
| pfu_aug1.0_44781.1_34318.t1 | 3 | 1 | EF-hand_5 | 23 | 40 | 5.5e-11 | 41.2 | 1.4e-05 | 0.019 | 14.2 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 2 | EF-hand_8 | 28 | 68 | 3.4e-10 | 39.3 | 0.0015 | 2.0 | 8.0 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 2 | EF-hand_6 | 52 | 76 | 7.5e-14 | 50.3 | 0.14 | 180.0 | 2.4 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 3 | EF-hand_8 | 113 | 139 | 3.4e-10 | 39.3 | 1.2e-05 | 0.017 | 14.7 |
| pfu_aug1.0_44781.1_34318.t1 | 2 | 2 | EF-hand_7 | 115 | 173 | 1.3e-18 | 66.8 | 2.5e-12 | 3.3e-09 | 36.7 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 3 | EF-hand_6 | 116 | 140 | 7.5e-14 | 50.3 | 2.9e-07 | 0.00039 | 20.0 |
| pfu_aug1.0_44781.1_34318.t1 | 3 | 2 | EF-hand_1 | 116 | 141 | 3.0e-13 | 47.9 | 1.0e-05 | 0.014 | 14.7 |
| pfu_aug1.0_44781.1_34318.t1 | 3 | 2 | EF-hand_5 | 117 | 132 | 5.5e-11 | 41.2 | 0.00052 | 0.7 | 9.3 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 4 | EF-hand_8 | 126 | 171 | 3.4e-10 | 39.3 | 2.2e-09 | 3.0e-06 | 26.7 |
| pfu_aug1.0_44781.1_34318.t1 | 3 | 3 | EF-hand_1 | 151 | 177 | 3.0e-13 | 47.9 | 1.0e-07 | 0.00013 | 20.9 |
| pfu_aug1.0_44781.1_34318.t1 | 4 | 4 | EF-hand_6 | 156 | 177 | 7.5e-14 | 50.3 | 5.5e-06 | 0.0074 | 16.0 |
| pfu_aug1.0_44781.1_34318.t1 | 3 | 3 | EF-hand_5 | 157 | 174 | 5.5e-11 | 41.2 | 1.2e-06 | 0.0016 | 17.6 |
Transcript
| Transcript ID | pfu_aug1.0_44781.1_34318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_44781.1_34318.t1 atgacgagtatgatttggatgtgcgaagttcgtagtgcgaagtccgaaatacacgtatttttcactgctgacgcggacga tgacggcttccttaatgtaagagagctgaagcgagccctggctgccataggacaaccaaacacagatgctgagattcaag atgttcttcaagatttcaatgaaggacccaatggtcacataagcaggattcagtttcgagcactaattagctataacgct gtcaggcgaagtagcctaaagaaagacattgctaaaataaaatctaaagttaatgcaaaaattaacaggaaaaagaaagc tgtggaacacaatggggatgtatttactctattcaaaatgtttgattatgatcgaaagggttatttggacagagaaaaaa tcaaaagaggattccggaaattaacgggtgaagaaattccggatgacgatgtagatgtgatgtatgagcaagcggatgaa aacggagacgggaaaatcgatatttatgattttgaaagatgcttaaagacgaacttcttcaatgatacttcgtaa |
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Protein
| Protein ID | pfu_aug1.0_44781.1_34318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_44781.1_34318.t1 MTSMIWMCEVRSAKSEIHVFFTADADDDGFLNVRELKRALAAIGQPNTDAEIQDVLQDFNEGPNGHISRIQFRALISYNA VRRSSLKKDIAKIKSKVNAKINRKKKAVEHNGDVFTLFKMFDYDRKGYLDREKIKRGFRKLTGEEIPDDDVDVMYEQADE NGDGKIDIYDFERCLKTNFFNDTS |
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