Gene
| Gene Model ID | pfu_aug1.0_4488.1_59527 |
|---|---|
| Locus | scaffold4488.1 : 7286 ... 22635 : - |
| To GenomeBrowser | scaffold4488.1:7286..22635 |
| Genes list of scaffold | scaffold4488.1 |
| Synonym | pfu_aug2.0_1689.1_31846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4488.1_59527.t1 | 1 | 1 | PIP49_N | 26 | 71 | 1.5e-07 | 31.2 | 3.4e-11 | 2.5e-07 | 30.4 |
| pfu_aug1.0_4488.1_59527.t1 | 1 | 1 | PIP49_C | 164 | 303 | 2.7e-31 | 108.4 | 3.7e-35 | 2.7e-31 | 108.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4488.1_59527.t1 | gi|260834841|ref|XP_002612418.1| | hypothetical protein BRAFLDRAFT_214336 [Branchiostoma floridae] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_4488.1_59527.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4488.1_59527.t1 atggtgcttgaccagtctacagtcttgtgcaagcgcattcttaatgcttgcactctggctgactgtgacggcgggactcc atggcgggccctgttgtgtcggcgctacagaaatggacaagttactgggagttcctgccatcatatttgtgagagtcaaa aaataacttttcagacatgcgcaaaccaccgtggtgggaaaatagtactaataacaaactgctcatcaggcgcatgcgtg ccgggaaaatccgtacaggctgtgttgaagactgcaaacttgaatggttccgtgagcgatgaaaacgacagtgtgttctt catacaaaacgttaccaaaaagtggcttagatacttaactctgcagataatttcaagagtaaaagacaaactgagacgaa agttacgaaaaacagaaatatcaaaactgattttcgattccgagaacttttctcatcaagataccacggtagcgactttg ctcagtggatggagacttgtagaacaaaatgaatatctgttcactaagagccaccaacatgttagttactatcctaaaat ctatggaacatgtggctccttctacttaactgaatatgttcctccagatctttcatattttccaaattttctgatcacga aagaagtgtcgtggaatatgagagttacggttgccatggaaatactaaacataacagaatccatggacaagaattttcac gaacctctccatttttgtgacgttaaagtttggaattatgggattagcccagtgggcgaagtgaaagttatagacactga ttcgatgtactacgagtctgacctcacagatactatgggaaaactgaattgcactagtcatgaacattgtgattttaacg actgccatggattctgtgattttactacggatattgttttcattttcgtgcatgaaaatcgacggcgggtgcggctagcc aaacaggggatgcttactcctcccgggcacctgtccccacctctggcttag |
|
Protein
| Protein ID | pfu_aug1.0_4488.1_59527.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4488.1_59527.t1 MVLDQSTVLCKRILNACTLADCDGGTPWRALLCRRYRNGQVTGSSCHHICESQKITFQTCANHRGGKIVLITNCSSGACV PGKSVQAVLKTANLNGSVSDENDSVFFIQNVTKKWLRYLTLQIISRVKDKLRRKLRKTEISKLIFDSENFSHQDTTVATL LSGWRLVEQNEYLFTKSHQHVSYYPKIYGTCGSFYLTEYVPPDLSYFPNFLITKEVSWNMRVTVAMEILNITESMDKNFH EPLHFCDVKVWNYGISPVGEVKVIDTDSMYYESDLTDTMGKLNCTSHEHCDFNDCHGFCDFTTDIVFIFVHENRRRVRLA KQGMLTPPGHLSPPLA |
|