Gene
Gene Model ID | pfu_aug1.0_44881.1_41335 |
---|---|
Locus | scaffold44881.1 : 96 ... 4675 : + |
To GenomeBrowser | scaffold44881.1:96..4675 |
Genes list of scaffold | scaffold44881.1 |
Synonym | pfu_aug2.0_432.1_07513 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_44881.1_41335.t1 | 3 | 1 | Ldl_recept_b | 32 | 74 | 1.2e-14 | 54.3 | 1.9e-07 | 0.0014 | 18.9 |
pfu_aug1.0_44881.1_41335.t1 | 3 | 2 | Ldl_recept_b | 77 | 116 | 1.2e-14 | 54.3 | 1.2e-09 | 8.8e-06 | 25.9 |
pfu_aug1.0_44881.1_41335.t1 | 1 | 1 | FXa_inhibition | 127 | 163 | 4.4e-11 | 42.7 | 8.6e-15 | 6.4e-11 | 42.1 |
pfu_aug1.0_44881.1_41335.t1 | 3 | 3 | Ldl_recept_b | 219 | 246 | 1.2e-14 | 54.3 | 6.6e-05 | 0.49 | 10.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_44881.1_41335.t1 | gi|321462894|gb|EFX73914.1| | hypothetical protein DAPPUDRAFT_307561 [Daphnia pulex] | 8.00141e-43 |
Transcript
Transcript ID | pfu_aug1.0_44881.1_41335.t1 |
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Definition | - |
>pfu_aug1.0_44881.1_41335.t1 atgcgacgagtcgacttgttgagctataattacgcagctctggtatcaggattacataacacgatagcgttagatttcca ttataataagagtaacatttattggacggatgttgttgacgataaaatatacagaggaaggatgacgtcaaacagtctga ttgatgttgagccaatcgtagatgttggtttagccacgaccgaaggacttgccatcgattggataggtaacaatctgtac tgggtcgagagcaatctagatcaaatcgaagcaaacaagtttgatggctccaatgtaacagtcattcagcaaaccatcac acaaccgtttgatctacaagtgtaccatccaaaacggcaaccaaacgccgttaatccgtgtaaggagaataatggaggat gctcgcatctgtgtctgatcaattttaatcagaaagcgggctgtaaatgtcctcatctatggaaactgaaaaaagacgga aaaacgtgtgagagagacatgagttttctattgttcggcaaaaataacgaaatccgtggagtggaccttgtcaacgcaaa ctacagtgtcatgccgaccattacattaccgcatgtaaaccgaccaatcgctgtggactttgatattggcattgcggcag atgcatcagaggaaggtcggatattgtgggcggacgaggggttaaaggtcatcaacagtgcacttatcaacggatcttct gtagatacaataattgactcgggtaagataaagacaaaatttatatgctttctctctgtgatacagtaa |
Protein
Protein ID | pfu_aug1.0_44881.1_41335.t1 |
---|---|
Definition | - |
>pfu_aug1.0_44881.1_41335.t1 MRRVDLLSYNYAALVSGLHNTIALDFHYNKSNIYWTDVVDDKIYRGRMTSNSLIDVEPIVDVGLATTEGLAIDWIGNNLY WVESNLDQIEANKFDGSNVTVIQQTITQPFDLQVYHPKRQPNAVNPCKENNGGCSHLCLINFNQKAGCKCPHLWKLKKDG KTCERDMSFLLFGKNNEIRGVDLVNANYSVMPTITLPHVNRPIAVDFDIGIAADASEEGRILWADEGLKVINSALINGSS VDTIIDSGKIKTKFICFLSVIQ |