Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4500.1_01750
Locus scaffold4500.1 : 1013 ... 9745 : -
To GenomeBrowser scaffold4500.1:1013..9745
Genes list of scaffold scaffold4500.1
Synonym pfu_aug2.0_631.1_04413

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4500.1_01750.t1 1 1 PAN_1 164 212 6.1e-07 29.1 2.2e-10 1.1e-06 28.2

Transcript
Transcript IDpfu_aug1.0_4500.1_01750.t1
Definition-
>pfu_aug1.0_4500.1_01750.t1
atgaacgcacaattgtggtgtaaaataaccacctcactggaaagatacttagcttctgacttcaacttcacttacagata
caatgacgatgtgttgtccatcaataatccaaaattcgcggattacctgagcagtatctatccttcggagcttgaagtca
aagaaactacagagacaaataattcagcatcctatttgaacatattgttgtcctacgacgctgatggtcacatgaacacc
tcactctatgacaaacgtgacgacttcaatttcagcattacaaacatttcttttctgagtagcaacatcccttcatcgcc
tcctaatggcgtgttcatatctcagttgatacgctatgccagagcaagtaccaaatataagggttttgttctgagagcta
ggcgtatttcagataagattctcagtcagggatatgtatgtgaccgactaacatcgtcactgaggaagttctacggtcga
tatgacgtggagaaccttaaaatgtacaccaccatgtcatataagatgtgtttaagggaatgcagtaaaacaatgcgatg
catgtccatcaattacaacagcgaccagttggaatgttttcttttggaaaccagtcacacagagtccatgctctcagata
agaatggatttacgtatgccttcccagaaccggttctcaaaacggagtaa

Protein
Protein IDpfu_aug1.0_4500.1_01750.t1
Definition-
>pfu_aug1.0_4500.1_01750.t1
MNAQLWCKITTSLERYLASDFNFTYRYNDDVLSINNPKFADYLSSIYPSELEVKETTETNNSASYLNILLSYDADGHMNT
SLYDKRDDFNFSITNISFLSSNIPSSPPNGVFISQLIRYARASTKYKGFVLRARRISDKILSQGYVCDRLTSSLRKFYGR
YDVENLKMYTTMSYKMCLRECSKTMRCMSINYNSDQLECFLLETSHTESMLSDKNGFTYAFPEPVLKTE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495