Gene
| Gene Model ID | pfu_aug1.0_4501.1_23590 |
|---|---|
| Locus | scaffold4501.1 : 13827 ... 15725 : - |
| To GenomeBrowser | scaffold4501.1:13827..15725 |
| Genes list of scaffold | scaffold4501.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to DDBJ HM483521 (Hyriopsis cumingii) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4501.1_23590.t1 | 4 | 1 | EF-hand_1 | 4 | 32 | 1.4e-39 | 130.3 | 1.5e-11 | 1.3e-08 | 33.5 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 1 | EF-hand_6 | 4 | 33 | 1.4e-31 | 105.4 | 7.2e-12 | 6.3e-09 | 34.9 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 1 | EF-hand_8 | 4 | 31 | 1.5e-29 | 101.3 | 1.1e-07 | 9.2e-05 | 21.9 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 1 | SPARC_Ca_bdg | 6 | 62 | 2.6e-09 | 37.1 | 1.8e-06 | 0.0015 | 18.4 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 1 | EF-hand_7 | 7 | 65 | 1.0e-34 | 118.4 | 1.2e-16 | 1.1e-13 | 51.1 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 1 | EF-hand_5 | 7 | 28 | 1.6e-29 | 99.9 | 1.0e-10 | 9.1e-08 | 31.1 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 1 | EF-hand_9 | 8 | 68 | 2.2e-12 | 46.6 | 3.0e-08 | 2.6e-05 | 24.0 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 1 | EF-hand_4 | 15 | 65 | 9.1e-06 | 25.3 | 0.002 | 1.8 | 8.3 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 2 | EF-hand_8 | 32 | 68 | 1.5e-29 | 101.3 | 4.1e-10 | 3.6e-07 | 29.7 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 2 | EF-hand_1 | 40 | 67 | 1.4e-39 | 130.3 | 2.1e-10 | 1.8e-07 | 29.9 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 2 | EF-hand_6 | 40 | 67 | 1.4e-31 | 105.4 | 2.5e-06 | 0.0022 | 17.7 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 2 | EF-hand_5 | 41 | 65 | 1.6e-29 | 99.9 | 5.7e-07 | 0.00049 | 19.3 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 3 | EF-hand_8 | 74 | 102 | 1.5e-29 | 101.3 | 6.8e-07 | 0.00059 | 19.3 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 2 | SPARC_Ca_bdg | 75 | 135 | 2.6e-09 | 37.1 | 4.4e-06 | 0.0038 | 17.2 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 3 | EF-hand_1 | 77 | 104 | 1.4e-39 | 130.3 | 1.0e-12 | 9.1e-10 | 37.1 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 3 | EF-hand_6 | 77 | 106 | 1.4e-31 | 105.4 | 7.5e-13 | 6.5e-10 | 38.0 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 2 | EF-hand_7 | 78 | 138 | 1.0e-34 | 118.4 | 2.1e-21 | 1.8e-18 | 66.3 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 3 | EF-hand_5 | 78 | 102 | 1.6e-29 | 99.9 | 8.9e-11 | 7.8e-08 | 31.3 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 2 | EF-hand_9 | 81 | 140 | 2.2e-12 | 46.6 | 2.5e-07 | 0.00022 | 21.0 |
| pfu_aug1.0_4501.1_23590.t1 | 2 | 2 | EF-hand_4 | 87 | 138 | 9.1e-06 | 25.3 | 1.5e-05 | 0.013 | 15.2 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 4 | EF-hand_8 | 90 | 138 | 1.5e-29 | 101.3 | 5.4e-15 | 4.7e-12 | 45.3 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 4 | EF-hand_1 | 113 | 140 | 1.4e-39 | 130.3 | 1.2e-11 | 1.0e-08 | 33.8 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 4 | EF-hand_5 | 117 | 138 | 1.6e-29 | 99.9 | 2.1e-06 | 0.0018 | 17.5 |
| pfu_aug1.0_4501.1_23590.t1 | 4 | 4 | EF-hand_6 | 119 | 139 | 1.4e-31 | 105.4 | 1.1e-05 | 0.0095 | 15.7 |
Transcript
| Transcript ID | pfu_aug1.0_4501.1_23590.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4501.1_23590.t1 atgactgccgaattccacgcggcattcagtctatttgacaaggacggagatgggactatcagtaagaaggaactggccag tgtgatgtcatcactcggacaaactccagctgggcatgaaataagggaccttatcaaatcaatggacgccgatggaagtg gtaccgtcgattttccggaatttcttgccatgatggccaagcgtctcaaagaaggagattcagaggaagaacttcgggaa gccttcagagtttttgataaagatggaaacgggtttataagtgcaaaagaactgcaacaagtgatgcatggactggggga gtatatgagcgacaaggatgtggaggagatgataaaagaagcagattatgatggggatggacatgttaactatgaggaat ttgtgcaaatgatgatgagaaaataa |
|
Protein
| Protein ID | pfu_aug1.0_4501.1_23590.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4501.1_23590.t1 MTAEFHAAFSLFDKDGDGTISKKELASVMSSLGQTPAGHEIRDLIKSMDADGSGTVDFPEFLAMMAKRLKEGDSEEELRE AFRVFDKDGNGFISAKELQQVMHGLGEYMSDKDVEEMIKEADYDGDGHVNYEEFVQMMMRK |
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