Gene
| Gene Model ID | pfu_aug1.0_4501.1_23593 |
|---|---|
| Locus | scaffold4501.1 : 29505 ... 42023 : - |
| To GenomeBrowser | scaffold4501.1:29505..42023 |
| Genes list of scaffold | scaffold4501.1 |
| Synonym | pfu_aug2.0_3349.1_32454 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4501.1_23593.t1 | 3 | 1 | EF-hand_8 | 2 | 43 | 1.2e-19 | 69.6 | 1.2e-07 | 0.00022 | 20.7 |
| pfu_aug1.0_4501.1_23593.t1 | 1 | 1 | EF-hand_7 | 23 | 85 | 4.4e-14 | 52.3 | 2.4e-17 | 4.4e-14 | 52.3 |
| pfu_aug1.0_4501.1_23593.t1 | 3 | 1 | EF-hand_1 | 24 | 50 | 1.8e-15 | 54.9 | 5.7e-11 | 1.1e-07 | 30.6 |
| pfu_aug1.0_4501.1_23593.t1 | 2 | 1 | EF-hand_6 | 24 | 49 | 1.6e-12 | 46.1 | 7.0e-11 | 1.3e-07 | 30.8 |
| pfu_aug1.0_4501.1_23593.t1 | 2 | 1 | EF-hand_5 | 24 | 47 | 3.9e-12 | 44.9 | 5.8e-10 | 1.1e-06 | 27.7 |
| pfu_aug1.0_4501.1_23593.t1 | 3 | 2 | EF-hand_8 | 36 | 88 | 1.2e-19 | 69.6 | 1.0e-18 | 1.9e-15 | 56.2 |
| pfu_aug1.0_4501.1_23593.t1 | 3 | 2 | EF-hand_1 | 60 | 87 | 1.8e-15 | 54.9 | 1.4e-11 | 2.7e-08 | 32.5 |
| pfu_aug1.0_4501.1_23593.t1 | 2 | 2 | EF-hand_6 | 63 | 87 | 1.6e-12 | 46.1 | 3.9e-06 | 0.0073 | 16.1 |
| pfu_aug1.0_4501.1_23593.t1 | 2 | 2 | EF-hand_5 | 64 | 85 | 3.9e-12 | 44.9 | 3.4e-09 | 6.4e-06 | 25.2 |
| pfu_aug1.0_4501.1_23593.t1 | 3 | 3 | EF-hand_8 | 87 | 92 | 1.2e-19 | 69.6 | 0.56 | 1000.0 | -0.6 |
| pfu_aug1.0_4501.1_23593.t1 | 3 | 3 | EF-hand_1 | 87 | 92 | 1.8e-15 | 54.9 | 0.24 | 450.0 | 0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4501.1_23593.t1 | gi|167534692|ref|XP_001749021.1| | hypothetical protein [Monosiga brevicollis MX1] | 3.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4501.1_23593.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4501.1_23593.t1 atatcatagattgggagggattccttaaaataattgtagaaatattaaaatcatcagacaaagactatcagttacgggaa gcattcatggcttttgattcagacggaagtggctcaatcgacagagcggaattgaaagaaatcatgttaaaaattatgcc tggagtttatacagaaacggaagtcgatgagctaatagacaaagctgacatggatggcgatggagagatagactttgacg aatttgtcaccatgatgaaagatcaggataacgatggcaacgagagcgactaa |
|
Protein
| Protein ID | pfu_aug1.0_4501.1_23593.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4501.1_23593.t1 IIDWEGFLKIIVEILKSSDKDYQLREAFMAFDSDGSGSIDRAELKEIMLKIMPGVYTETEVDELIDKADMDGDGEIDFDE FVTMMKDQDNDGNESD |
|