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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4505.1_08912
Locus scaffold4505.1 : 1 ... 8415 : -
To GenomeBrowser scaffold4505.1:1..8415
Genes list of scaffold scaffold4505.1
Synonym pfu_aug2.0_3971.1_05928

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4505.1_08912.t1 2 1 Mab-21 127 299 4.0e-35 121.3 2.7e-39 4.0e-35 121.3
pfu_aug1.0_4505.1_08912.t1 2 2 Mab-21 370 419 4.0e-35 121.3 0.16 2400.0 -2.7

Transcript
Transcript IDpfu_aug1.0_4505.1_08912.t1
Definition-
>pfu_aug1.0_4505.1_08912.t1
atgagcataacttttgaatgtaaagcttggacacaattaatgagtggaagtagagcggaaggttttgtattcaaatcatc
cgatgtagatattatggctattatcaaaaacgtgatggttattgatcatgaattacaaaatgtcttaaacacaacctcta
ttcctgtggtacttcttatggaaactgatagcgctccaccaggattcactttgcttaaatgcgtaagatataatagtaga
gtagagggcaatcatatactgaaaactttatgccttagaggaaataacgcttacatgagtagtgaaaaagctaaaaaaaa
atttgatgtgaccagaggaaggacatcggtacatggaccctgtagaagtggtacaatgtttgggatagattatgattttg
catatactttgaaatgtccattttggccaaaaagtgctcattcctttatttatcggtcactacatagtgggtggcctaca
attgatggacttatagatatatgtaaagatggatgtctctttgttccaatcaatagtaaacaacattccttaagtgataa
cacggatctagaatggaggatatcattttcactggcagaaaagaaattggtctactccatgaaccattgtcagtttctat
gttatggattgatgaaaatatttctgaacgaagttttgaaagaaatttccgagactcagacagaaaatggaaacgtccta
tgttcataccttatgaaaactgccgtgttttgggaaatagctgagtgtggaaacgactggtcagatcaaaactttttaaa
taagtttttaaatgtcttcagtcgtgtcataaagtgggtagaagaagggtactgtccgaactttttcataccagagcata
atatgttttacgggaagatatatgggagacgacagagagagctgatattaagattacgttcattatatgatgaagatatc
ttgtgtatttctcgttgtaagtctttaggtgacatgctatttagaatgttgaattaccaatttctattcgatttagaaca
aatgcttgtagctgatgatttggcttttcgtaaggaaacaacgttaagaataaatcaccttttacaaatgctctctgtaa
tatttgcaaaacgcggttttcaaaatgtgacttcaaataaactgcagtatttgttcacaaaaagagcaagatatatttta
aggaagacaaaaacttcacattgccttagtacaatacatcaagctgttatttcatacatgaatggagagtatcataaaac
aatacaaattgttgatcacattcaacaaagactccagacacgaccatatatgtataaatgggacatagatcatactatag
tcatgagatctagacaacaaggaatgtcgtatgaagagatagtgaaaacatttatcgttacttattacgagtacaacgct
gttatgtctattccggagttaattctggagagtattttttccaaacaaaacattccaagtggtcttgttcctataccacc
tttagttttcttactttttcttgtgatccttagttatagtcgactcaataaactggtagagagagaaaaagtgttggatg
cattacattcggtactctaccatgacaataatcatcatatttactctagattcagagcgatatcacgggagatcttaggt
atatgtcagcagctctgtggtgactatgtcggtgcttatcaatcctacctcaatgctctaaatgacgagtataatgaatt
cagagaagccacgatcatccgtattcttattcttttgttcgacttacataaccgttcttag

Protein
Protein IDpfu_aug1.0_4505.1_08912.t1
Definition-
>pfu_aug1.0_4505.1_08912.t1
MSITFECKAWTQLMSGSRAEGFVFKSSDVDIMAIIKNVMVIDHELQNVLNTTSIPVVLLMETDSAPPGFTLLKCVRYNSR
VEGNHILKTLCLRGNNAYMSSEKAKKKFDVTRGRTSVHGPCRSGTMFGIDYDFAYTLKCPFWPKSAHSFIYRSLHSGWPT
IDGLIDICKDGCLFVPINSKQHSLSDNTDLEWRISFSLAEKKLVYSMNHCQFLCYGLMKIFLNEVLKEISETQTENGNVL
CSYLMKTAVFWEIAECGNDWSDQNFLNKFLNVFSRVIKWVEEGYCPNFFIPEHNMFYGKIYGRRQRELILRLRSLYDEDI
LCISRCKSLGDMLFRMLNYQFLFDLEQMLVADDLAFRKETTLRINHLLQMLSVIFAKRGFQNVTSNKLQYLFTKRARYIL
RKTKTSHCLSTIHQAVISYMNGEYHKTIQIVDHIQQRLQTRPYMYKWDIDHTIVMRSRQQGMSYEEIVKTFIVTYYEYNA
VMSIPELILESIFSKQNIPSGLVPIPPLVFLLFLVILSYSRLNKLVEREKVLDALHSVLYHDNNHHIYSRFRAISREILG
ICQQLCGDYVGAYQSYLNALNDEYNEFREATIIRILILLFDLHNRS

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