Gene
| Gene Model ID | pfu_aug1.0_4506.1_52303 |
|---|---|
| Locus | scaffold4506.1 : 28775 ... 50725 : - |
| To GenomeBrowser | scaffold4506.1:28775..50725 |
| Genes list of scaffold | scaffold4506.1 |
| Synonym | pfu_aug2.0_86.1_20186 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4506.1_52303.t1 | 2 | 1 | Creb_binding | 284 | 317 | 2.1e-13 | 50.3 | 0.44 | 1300.0 | -0.5 |
| pfu_aug1.0_4506.1_52303.t1 | 3 | 1 | zf-TAZ | 306 | 352 | 2.5e-25 | 88.2 | 2.6e-15 | 7.8e-12 | 45.0 |
| pfu_aug1.0_4506.1_52303.t1 | 1 | 1 | KAT11 | 398 | 712 | 0.0 | 275.2 | 0.0 | 0.0 | 275.2 |
| pfu_aug1.0_4506.1_52303.t1 | 1 | 1 | ZZ | 768 | 807 | 3.3e-12 | 45.7 | 1.1e-15 | 3.3e-12 | 45.7 |
| pfu_aug1.0_4506.1_52303.t1 | 3 | 2 | zf-TAZ | 770 | 797 | 2.5e-25 | 88.2 | 0.18 | 530.0 | 0.7 |
| pfu_aug1.0_4506.1_52303.t1 | 3 | 3 | zf-TAZ | 834 | 906 | 2.5e-25 | 88.2 | 4.4e-18 | 1.3e-14 | 53.9 |
| pfu_aug1.0_4506.1_52303.t1 | 2 | 2 | Creb_binding | 1038 | 1126 | 2.1e-13 | 50.3 | 7.1e-17 | 2.1e-13 | 50.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4506.1_52303.t1 | gi|325296799|ref|NP_001191640.1| | CREB-binding protein [Aplysia californica] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 2 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_4506.1_52303.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4506.1_52303.t1 atggccgaccaagttgataatgtcgaagggcccccgtcggccaaacgtgctaagatttcatccccaagaccatctagtga aggcggagaaataaacattggtgatcttctgaatattgttgatgcactgcctgatgagctcatgggttcaaatgatattt cacaaaatggcacaggagatactcaccaacctccagcccaggatacaacgcaaagacatcgtgagcttacacaactgctg tctcagtctggaacatcaacaccaccacaacgtaatacagctagcccaatgaacatgcttccgccaagcaaaagccccat gggaatgggtgctttgaattctgtaaaaagtcccctttcatcaccaactcatggtatagtgaacaaaccaaatgtgtctc agcatacaggtatagacgctaactttgctgtaagtagtgcgaccttagtgggacatcacaaccaaggactatcagtgtca atgtcaaactctaatcagctacgagggcataatccaaatatggtcggcgctggagtagcatcaatgaatagtctgaacat gtcgcaacaaaatcaaataatgacaaacggaccacattattcaaccagtggacccacacagttacgaggtgctgcgtcaa ctatgggtcaacagcttccaagtatgccacagaacgtcatgggagggatgaactcccagcagatacatactcacaacgca atgggacattcaatgttaaatcagcaaaatcaacaaatgatgaagcaacagtctatgaggtctgttgtcatgtctggacc atctccaagtccaggggcagtggggccaggggatggaactgtccaaggtcaacaagcccctaccagctctggaccaccaa cagctgacccagaaaaacgcaagctgattcagcaacagaccatgaaaaatgttcttaatcatatgactacatgtaatgct ggaaaatcctgcttagttgcccattgtgcctcgtcccggcagattattactcattggaagaactgtacgagaaatgactg tccagtttgtctccctctaaaacagacacagaaaaatcctgctagcagtgcagctgctgctgctgctgctgtacagacga ccacaaatactaatgatttactgtattcaggcattccatctaccaagcttggttcttacctggaaaaccgagtgaataac ttcctaaagaagaaggatgctggtgctggggaagtgacaatcaaagtgctatcttgtacagacaaaactgtcgaggtcaa acctggaatgaaaagcagatatgtagataatagtgagatgccagagagctttccttataagtcaaaagccatgtttgcat ttgaggagattgacggtacagatgtttgtttctttggaatgcatgtacaggagtatggctcggaatgttccatgccaaat acgaggcgtgtttacatctcgtacctggacagtgtttatttcttccaacctcgtcacctaaggacggctgtataccacga gatcttgataggatacttggagtatgtcaaacagctaggttacatgtgggctcatatatgggcgtgccctcccagtgaag gggatgactatatattccattgtcaccctcctgagcagaaaattcccaaacccaaaaggctacaggagtggtacaagaaa atgttagataaagccatcatagagcgttgtgtgatagattataaggatatccttaaagatgccatagaaaacaatattaa aagtgctacagagattccatactttgagggtgatttctggcctaacgtgctggaggagagcattaaggagctcgatcagg aggaggaagagaaacggaaacgagaagaggccgaggctgcggcagcggagttggaacccgagtgtatagatgagggggag ggtagtaatcagggagttggaaaaaagaaggggaagagtggtcggaacaaaaaggccaataaaagtaagagtagtcaaag gaagaacaacaagaaatctaatatgcctcatggtggaaatgatctcactcaaaaaatatatgctaccatggagaagcata aagaggttttctttgtcattcggctgcagagcccccagattgctcaatctttgcctcccattaaagacgttgatccgttt atttcttgtgatcttatggacggccgagatgcttttcttaccatggcgagggacaagcatcaggagttctcttctcttag acgagccaagtactccacaatggctatgttatatgaactgcataatcagggacgtgacaattttgtgtatacatgcaata gttgtaaagctcatgtggaaacaagatggcattgttccgtttgtgaggactttgacttgtgtaatcagtgctatgagaag accgggcatgaccataagatggagaagcttggctttgaccttgatgatggtacggctagcaacgataaacaagaagatcc tcagcaatctcgaagacagtctatacagcgctgtatacaatcactcgtacatgcttgtcagtgtagggatgctaattgta gacttcctagttgtcagaagatgaaacgtgttgtttctcatacaaagtgttgtcgaaagaagacgaacggtgtgtgtccg atttgtaaacagcttattgcattgtgtttataccatgcgaaacattgtacagaaaataagtgtcaggtgccattctgttt acaaataaaacataaactcaggcagcagcaacttcagcacagactgcaacaagctcaaatgttgcgcaggcggatggctt ccatgcagaggagtacaacaacaccaacaactcaagtaacatcacagccatcccctcagatgcaatctgtgcagccccag caacctacaataacgggcaaaccctcacagcccccacctataaatgccattcaggcagctcagcatgttaaacaaatagc tgcacagcaggtccattctggccctatgcctacgtcaaatcctgtaacgcagatggcaccacctatatcgtctaccatgc ctcagcagcagacaacgggtatgtcaccacaacagaactggagtaatcctcagtatccagtcagaatgaggcctcagatg cctcacggaggcaaaccaggaatgcctcagatacagtcacccagcgttcagggctccggtgtcggtggtaatatacaaat gcagccaccaatgaatcccatgaaccaaccacagagacagtctagtcttcctgctttacaacagctgttacaaactctca agtcaccttcatccatgcaccaacaacaacaagtgttgcaaatactcaagtccaatcctcagcttatggcagcttttctg gctcagagggccaaacaacagcaacaacaacagcaacagcaacaaaatcaacaaccaaacccacagaccaacatggtgca gaatgccaagccacatcctaacatgggcatggggatgaaccctaacggtggacaaccaaaccaacaacagctgtggtacc agcaacaacaacagaggatgagactgcaacagcaacaacaacagcaacaacaacatcaacaacaacaacaacaacaacaa caaatcagacaattccaagcacctcagcctttcccacaacgaacacaaatgccttacacacaacaagcttcataccaagg tgatggatctcagcacatgcagcagtttaacagtcagatgttgcaagtccagcagcaacaacagcaactcaggcaacata tggtaggtggcgggggcaaaccagtcagccctcaaatggctgccaaccaaactccctcaccacaacaacagttcatgcaa caagtccggtcccctacgtcagcattgcctcaaacagtccgatcacctcaaccaaccccatcaccccatcaacaactaaa cccatcaccacggcaaacacaaatgtcaccacatcatagtgttacaaatccatctcatcctggagtagtgggctctgagc caaatcaaatgacttctgaccccggcatgttattatcaggtggtttattacaaggtcaagctcccgaccctggacttggc ttaccacaggacacggaggtagctcctctcacccctcaagatcagctgtctcgatatgtagagactttgtag |
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Protein
| Protein ID | pfu_aug1.0_4506.1_52303.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4506.1_52303.t1 MADQVDNVEGPPSAKRAKISSPRPSSEGGEINIGDLLNIVDALPDELMGSNDISQNGTGDTHQPPAQDTTQRHRELTQLL SQSGTSTPPQRNTASPMNMLPPSKSPMGMGALNSVKSPLSSPTHGIVNKPNVSQHTGIDANFAVSSATLVGHHNQGLSVS MSNSNQLRGHNPNMVGAGVASMNSLNMSQQNQIMTNGPHYSTSGPTQLRGAASTMGQQLPSMPQNVMGGMNSQQIHTHNA MGHSMLNQQNQQMMKQQSMRSVVMSGPSPSPGAVGPGDGTVQGQQAPTSSGPPTADPEKRKLIQQQTMKNVLNHMTTCNA GKSCLVAHCASSRQIITHWKNCTRNDCPVCLPLKQTQKNPASSAAAAAAAVQTTTNTNDLLYSGIPSTKLGSYLENRVNN FLKKKDAGAGEVTIKVLSCTDKTVEVKPGMKSRYVDNSEMPESFPYKSKAMFAFEEIDGTDVCFFGMHVQEYGSECSMPN TRRVYISYLDSVYFFQPRHLRTAVYHEILIGYLEYVKQLGYMWAHIWACPPSEGDDYIFHCHPPEQKIPKPKRLQEWYKK MLDKAIIERCVIDYKDILKDAIENNIKSATEIPYFEGDFWPNVLEESIKELDQEEEEKRKREEAEAAAAELEPECIDEGE GSNQGVGKKKGKSGRNKKANKSKSSQRKNNKKSNMPHGGNDLTQKIYATMEKHKEVFFVIRLQSPQIAQSLPPIKDVDPF ISCDLMDGRDAFLTMARDKHQEFSSLRRAKYSTMAMLYELHNQGRDNFVYTCNSCKAHVETRWHCSVCEDFDLCNQCYEK TGHDHKMEKLGFDLDDGTASNDKQEDPQQSRRQSIQRCIQSLVHACQCRDANCRLPSCQKMKRVVSHTKCCRKKTNGVCP ICKQLIALCLYHAKHCTENKCQVPFCLQIKHKLRQQQLQHRLQQAQMLRRRMASMQRSTTTPTTQVTSQPSPQMQSVQPQ QPTITGKPSQPPPINAIQAAQHVKQIAAQQVHSGPMPTSNPVTQMAPPISSTMPQQQTTGMSPQQNWSNPQYPVRMRPQM PHGGKPGMPQIQSPSVQGSGVGGNIQMQPPMNPMNQPQRQSSLPALQQLLQTLKSPSSMHQQQQVLQILKSNPQLMAAFL AQRAKQQQQQQQQQQNQQPNPQTNMVQNAKPHPNMGMGMNPNGGQPNQQQLWYQQQQQRMRLQQQQQQQQQHQQQQQQQQ QIRQFQAPQPFPQRTQMPYTQQASYQGDGSQHMQQFNSQMLQVQQQQQQLRQHMVGGGGKPVSPQMAANQTPSPQQQFMQ QVRSPTSALPQTVRSPQPTPSPHQQLNPSPRQTQMSPHHSVTNPSHPGVVGSEPNQMTSDPGMLLSGGLLQGQAPDPGLG LPQDTEVAPLTPQDQLSRYVETL |
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