Gene
| Gene Model ID | pfu_aug1.0_4507.1_37905 |
|---|---|
| Locus | scaffold4507.1 : 1 ... 7660 : + |
| To GenomeBrowser | scaffold4507.1:1..7660 |
| Genes list of scaffold | scaffold4507.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4507.1_37905.t1 | 1 | 1 | AMP-binding | 19 | 91 | 3.4e-23 | 81.7 | 9.4e-27 | 4.6e-23 | 81.2 |
| pfu_aug1.0_4507.1_37905.t1 | 1 | 1 | AMP-binding_C | 100 | 175 | 2.0e-16 | 60.6 | 6.7e-20 | 3.3e-16 | 59.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4507.1_37905.t1 | gi|56478075|ref|YP_159664.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_4507.1_37905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4507.1_37905.t1 gttaacatcaatcccctttacagacaatacgagctggagtacgctctgaggaagacaaagatagtagatgaggatggtaa tgtggtccctgtgaatacggccggtgagatgtgtacacgtggttacaccaccatgttgtattactgggatgacccagaca gaactcgtgacacaatcaccgcagataggtggtatcactcaggggatatggcaacgatggatgaagatggattctgtcaa attgtggggcggatcaaggacatgattataaggggtggagaaaatatatatcctacagaaatagagcaggtgctttatac acatccagatataaaggacatacagattgttggtgtaccagatgagcgtttgggtgaggaggtctacgcttttgttcaac ttaaagatggccatgctgccacgggggaagatattaaacaattctgcagagaaaagatggcgcgattcaaagttcctcga tacgtggattttgtacacgagtttccaatgacagttacagggaaagtacagaaattcaaattaagagaaattgcccaaaa taaaatgggaagtagcagttag |
|
Protein
| Protein ID | pfu_aug1.0_4507.1_37905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4507.1_37905.t1 VNINPLYRQYELEYALRKTKIVDEDGNVVPVNTAGEMCTRGYTTMLYYWDDPDRTRDTITADRWYHSGDMATMDEDGFCQ IVGRIKDMIIRGGENIYPTEIEQVLYTHPDIKDIQIVGVPDERLGEEVYAFVQLKDGHAATGEDIKQFCREKMARFKVPR YVDFVHEFPMTVTGKVQKFKLREIAQNKMGSSS |
|