Gene
| Gene Model ID | pfu_aug1.0_4507.1_37909 |
|---|---|
| Locus | scaffold4507.1 : 55827 ... 63425 : - |
| To GenomeBrowser | scaffold4507.1:55827..63425 |
| Genes list of scaffold | scaffold4507.1 |
| Synonym | pfu_aug2.0_3107.1_25637 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4507.1_37909.t1 | 1 | 1 | Sarcoglycan_1 | 10 | 102 | 3.7e-19 | 68.9 | 1.2e-22 | 4.6e-19 | 68.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4507.1_37909.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4507.1_37909.t1 atgagagcacgggatgaagagctaaacatctctagtgtccttactcttgaagccctgagtacatcattacttatgtatgc atcagatgaagtacagattaattccaagactggcagtataggtctaatggcagccaatgaaatagctttgatatccaaag atataatttccttggattctgagaatatcttcctcaagaatcttccaacatcgacagtaaatagcggacaacaaagtgga cgtgtttatcagctctgcatgtgccaccgcacgggtcgactgttcctggcgccccctggtggaggatgccaagcaagcaa agacatatgtagataa |
|
Protein
| Protein ID | pfu_aug1.0_4507.1_37909.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4507.1_37909.t1 MRARDEELNISSVLTLEALSTSLLMYASDEVQINSKTGSIGLMAANEIALISKDIISLDSENIFLKNLPTSTVNSGQQSG RVYQLCMCHRTGRLFLAPPGGGCQASKDICR |
|