Gene
| Gene Model ID | pfu_aug1.0_4520.1_30706 |
|---|---|
| Locus | scaffold4520.1 : 1 ... 20431 : + |
| To GenomeBrowser | scaffold4520.1:1..20431 |
| Genes list of scaffold | scaffold4520.1 |
| Synonym | pfu_aug2.0_6480.1_02855 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4520.1_30706.t1 | 1 | 1 | Homeobox | 7 | 63 | 3.8e-19 | 68.0 | 8.0e-23 | 5.9e-19 | 67.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4520.1_30706.t1 | gi|340386324|ref|XP_003391658.1| | 5.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_4520.1_30706.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4520.1_30706.t1 attcagacaccaagcgccctcgccggacgcgtaccgttttctctgatgacgctttggacgcactcgaggacgcattccag gagaattgttacccggatgttttccaacgctattctctcgcacaggacatcggagaagaagagtcaagaatccaggtatg gttccagaacaggagagccaggtccaagcgtcaacggaaagtctcaaacagtcaacttaagaaatcattatcgtcacgcg atctgtcagcttcaaccacaacattgagaccaccgtctcgtgcgtgtgaccagccttccagttctgacggctgccgaccc attccaccatactatcccgttttaccagcctatgtgatcccagctcttccgtacgcaccatcctggagtttccaaccagc catgctgcagacccccgggggaatggtacctcctcctctcatccatcccagatttgagccttcctcaccgctctggtctc cgggcttcagtccgtctttcaagaagatattcgacttcccgtccaaccctctgtcaccactcccctctacaccagaggtt tcccggggtgccgaagacaacttatctacgttccgtatcactcatgcgggtggctttgcagagcgcagtggaccagattc cgttactctccgtgttccttttaaatcttcatctatttacacaccgctccatgtgcctggaataccagccccgcccccta ggtcacatgatgcaaataatgtctctggattggaggatcttagcccagctgactccgcctactccagtgctagtggttcc agtagtgagttacagaccacccatcttaacagcccaactaccccgcctagtgtataa |
|
Protein
| Protein ID | pfu_aug1.0_4520.1_30706.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4520.1_30706.t1 SDTKRPRRTRTVFSDDALDALEDAFQENCYPDVFQRYSLAQDIGEEESRIQVWFQNRRARSKRQRKVSNSQLKKSLSSRD LSASTTTLRPPSRACDQPSSSDGCRPIPPYYPVLPAYVIPALPYAPSWSFQPAMLQTPGGMVPPPLIHPRFEPSSPLWSP GFSPSFKKIFDFPSNPLSPLPSTPEVSRGAEDNLSTFRITHAGGFAERSGPDSVTLRVPFKSSSIYTPLHVPGIPAPPPR SHDANNVSGLEDLSPADSAYSSASGSSSELQTTHLNSPTTPPSV |
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