Gene
| Gene Model ID | pfu_aug1.0_4522.1_37913 |
|---|---|
| Locus | scaffold4522.1 : 1 ... 25815 : + |
| To GenomeBrowser | scaffold4522.1:1..25815 |
| Genes list of scaffold | scaffold4522.1 |
| Synonym | pfu_aug2.0_653.1_11045 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4522.1_37913.t1 | 1 | 1 | AAA_6 | 2 | 147 | 0.0 | 196.3 | 0.0 | 0.0 | 193.3 |
| pfu_aug1.0_4522.1_37913.t1 | 4 | 1 | AAA_5 | 2 | 76 | 5.0e-15 | 55.4 | 0.00036 | 0.18 | 11.5 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 1 | T2SE | 206 | 247 | 1.5e-06 | 27.3 | 0.00046 | 0.23 | 10.2 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 1 | ResIII | 217 | 295 | 8.7e-07 | 28.9 | 0.00015 | 0.075 | 12.8 |
| pfu_aug1.0_4522.1_37913.t1 | 4 | 2 | AAA_5 | 233 | 328 | 5.0e-15 | 55.4 | 2.2e-06 | 0.0011 | 18.6 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 1 | AAA_22 | 233 | 334 | 2.9e-06 | 27.4 | 0.00035 | 0.18 | 11.9 |
| pfu_aug1.0_4522.1_37913.t1 | 1 | 1 | AAA_7 | 540 | 806 | 0.0 | 171.8 | 0.0 | 0.0 | 170.6 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 2 | T2SE | 546 | 596 | 1.5e-06 | 27.3 | 2.3e-05 | 0.012 | 14.5 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 2 | ResIII | 568 | 595 | 8.7e-07 | 28.9 | 9.2e-05 | 0.047 | 13.5 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 2 | AAA_22 | 570 | 593 | 2.9e-06 | 27.4 | 0.00055 | 0.28 | 11.3 |
| pfu_aug1.0_4522.1_37913.t1 | 4 | 3 | AAA_5 | 573 | 711 | 5.0e-15 | 55.4 | 6.5e-07 | 0.00033 | 20.3 |
| pfu_aug1.0_4522.1_37913.t1 | 4 | 4 | AAA_5 | 693 | 719 | 5.0e-15 | 55.4 | 0.29 | 150.0 | 2.0 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 1 | AAA_8 | 884 | 914 | 2.4e-07 | 30.0 | 4.5e-06 | 0.0023 | 16.9 |
| pfu_aug1.0_4522.1_37913.t1 | 2 | 2 | AAA_8 | 926 | 964 | 2.4e-07 | 30.0 | 0.00019 | 0.099 | 11.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4522.1_37913.t1 | gi|326671940|ref|XP_002663840.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4522.1_37913.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4522.1_37913.t1 ttccggtgcatgggcatgctttgatgaattcaaccgtataaacattgaagtgctgtcggtagtcgccatgcaaattatta ccattcaaaaagccctggaaaataaggttgaccgtttcatgtttgagggagtggagttgttattgaggccatcttgtgcc gtcttcgtcacaatgaaccctggctacgccggaagaacagagctcccggacaatctcaaggccctgttccgtcctgtagc tatgatggtaccggactatgccctgattgctgaaatctctctcttctcctttggtttctcagaggccagagctctgtcaa agaagattgtatccacattcaaactttcatcagagcagcttagttcacaggaccattacgattttggtatgagagccgtg aagtccgtcatttctgctgccggtaatttgaagaggcagtacccagatatgaacgaggaactaattgtactgcgggccat cagggatgtcaacgtacctaagttcttggtagacgatctgaagctgttcagtggtatcgtctccgatctcttccccaaca tagaggaacagcccatcgactatggagccctggatacgtcactaaggaagacttgtaccaagaatggactcaaggacgtg gaaggatttatcaacaagtgtatccagctgtttgagacgacagtggtcaggcatggtcttatgttggtaggacctacagg atctggtaaaacaaagtgctacgacgttttgaagaatgcgcagacagcattaaagggtgagatgtctccggcaggtacga cattcgagcagaccattacgtacgtccttaaccccaagtccatcaccatgggtcagttgtacggtgaatttgaccctctc actcatgaatggactgatggtattttatcaaccctgatccgtatcggatcctcggccacagatcccaagaagagatgcca tgtgattgacattgtcaatcatgcttgtcgtcattgtcatcactgtcagtattatcatattatcgttgtcatcatgattg aagtcattgtcatcaatgtcattattgtcattgtcatcatgattgttgtcattgtcatcatgattgttgccattgtcatc actgtcattattataattgtcataatgggagacaagccaatcccacaagagagattggaccgtattgcggagctgattga gccgtggttcctattctccctgatctggtcgatcggagctacaggcgataacgacagctggagcaagttctcaaaatggc tgagggaaaagatgaagaaagaagacacaccagacatcacatcatttggcagaattttttattgtgacgtcatatttgat cgcactgactttatacattgtcatgtttcctattatgacgtcacaatgaaaatgtcgccaaattttgtgatgtctggtgt ctgtccgccgaatgaatctactggaaaatcagctacagaggaaggaattgtacatgactatgttttggatgatgcaggaa ttagcagtagtgctggagatgaaaatattgaagaggagaatacagaaaagaaaaaggtgcaatggaggaattggttatac ggacaaccagactacgctgtgtctcccgacactaaattctctgacatcatcgtgccgaccatcgacaccatcagaatgtc acatctacttgagatgcttcttagtaacaagaaaacggttctgtgcgtgggacctacaggtactggtaagacactaacga ttgccgacaagctgtcttctaaaatgcccaaagagttcctgccagaattcatcgtcttctctgccaagaccagtgccaac caaacccaggatctcattgacggaaaactcgacaagaggcgtaagggagtatttggtccacctcttggaaaatacttcat tttcttcattgacgacttgaacatgccggctctggaggtgttcggggctcaacctccgatagaactgatccgacagtgga tggacttcaaaggatggtatgacagaaaactcatcggtgactttaagaacttggtggacgtgaacttctgctgtgctatg gggccaccaggaggaggtaggaatcctgtaacggcacgtttgatgcggcactttaacttcctggccttcacggaaatgga agatccgagcaagaagaaaatcttcggaacaattctgaaatcgtggatcccaccaagtgtgacgtctttcaacgatcaga tggtggagacgtgtatatcggtgtttaacaccatcaccacccagctgttaccgactccagccaagtctcactacaccttc aacttacgtgacttgtccaaagtcttccagggtattcttatgttggagccagccaaaatcgagggaattaacgacctgat gaagctgtggtaccatgaaagctgccgtgtgttccaggatcgtctcgtgaacgatgaagatcgagattggttcgatgaac taatgaaaagtaaaatgaaatcagactttaatgttgatcctgcagaagtgcttaaaaatcaaccaatcatctttggagat ttcttgactcaaggaggaagtgacaaaccctatgttgaaattactgatcatgaaaagatggtgaagatgctagatgaata cttagaggattacaaccagattaacacagctcagatgagacttgtgttgtttatggatgcagtcaagcatgtcagtcgaa tcggccgtatcatcagacagcccctcgaatttgatgatgaaactgtgaccatgtgccagatgattcagttgtctgtggcc agatactctgataaattcttgtcagaactttctcgacataattatgtgacacccacaagctacctagaacttttaggaat tttctcaaaacttgtcggaatgaaaaagacggagctcagcactgctagaaacagactgaaaactggtctagacaagccgg gagagaaggtgaatgattactgggagcctggtaaaggcatgctgtcagatcctggtaaattcttagaaagtctgtttaag tttgacaaagataacatccctgatgatgtgataaagaagatccagccactcattgacaatcctgacttcaccccagcggc tatcgcaaag |
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Protein
| Protein ID | pfu_aug1.0_4522.1_37913.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4522.1_37913.t1 SGAWACFDEFNRINIEVLSVVAMQIITIQKALENKVDRFMFEGVELLLRPSCAVFVTMNPGYAGRTELPDNLKALFRPVA MMVPDYALIAEISLFSFGFSEARALSKKIVSTFKLSSEQLSSQDHYDFGMRAVKSVISAAGNLKRQYPDMNEELIVLRAI RDVNVPKFLVDDLKLFSGIVSDLFPNIEEQPIDYGALDTSLRKTCTKNGLKDVEGFINKCIQLFETTVVRHGLMLVGPTG SGKTKCYDVLKNAQTALKGEMSPAGTTFEQTITYVLNPKSITMGQLYGEFDPLTHEWTDGILSTLIRIGSSATDPKKRCH VIDIVNHACRHCHHCQYYHIIVVIMIEVIVINVIIVIVIMIVVIVIMIVAIVITVIIIIVIMGDKPIPQERLDRIAELIE PWFLFSLIWSIGATGDNDSWSKFSKWLREKMKKEDTPDITSFGRIFYCDVIFDRTDFIHCHVSYYDVTMKMSPNFVMSGV CPPNESTGKSATEEGIVHDYVLDDAGISSSAGDENIEEENTEKKKVQWRNWLYGQPDYAVSPDTKFSDIIVPTIDTIRMS HLLEMLLSNKKTVLCVGPTGTGKTLTIADKLSSKMPKEFLPEFIVFSAKTSANQTQDLIDGKLDKRRKGVFGPPLGKYFI FFIDDLNMPALEVFGAQPPIELIRQWMDFKGWYDRKLIGDFKNLVDVNFCCAMGPPGGGRNPVTARLMRHFNFLAFTEME DPSKKKIFGTILKSWIPPSVTSFNDQMVETCISVFNTITTQLLPTPAKSHYTFNLRDLSKVFQGILMLEPAKIEGINDLM KLWYHESCRVFQDRLVNDEDRDWFDELMKSKMKSDFNVDPAEVLKNQPIIFGDFLTQGGSDKPYVEITDHEKMVKMLDEY LEDYNQINTAQMRLVLFMDAVKHVSRIGRIIRQPLEFDDETVTMCQMIQLSVARYSDKFLSELSRHNYVTPTSYLELLGI FSKLVGMKKTELSTARNRLKTGLDKPGEKVNDYWEPGKGMLSDPGKFLESLFKFDKDNIPDDVIKKIQPLIDNPDFTPAA IAK |
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