Gene
| Gene Model ID | pfu_aug1.0_4532.1_67001 |
|---|---|
| Locus | scaffold4532.1 : 45806 ... 58663 : + |
| To GenomeBrowser | scaffold4532.1:45806..58663 |
| Genes list of scaffold | scaffold4532.1 |
| Synonym | pfu_aug2.0_563.1_10940 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4532.1_67001.t1 | 3 | 1 | Synaptobrevin | 25 | 41 | 2.2e-17 | 62.4 | 0.15 | 550.0 | 0.2 |
| pfu_aug1.0_4532.1_67001.t1 | 3 | 2 | Synaptobrevin | 124 | 148 | 2.2e-17 | 62.4 | 0.0078 | 29.0 | 4.3 |
| pfu_aug1.0_4532.1_67001.t1 | 3 | 3 | Synaptobrevin | 271 | 357 | 2.2e-17 | 62.4 | 5.8e-21 | 2.2e-17 | 62.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4532.1_67001.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4532.1_67001.t1 atgccaagtaccgagcaacctagggcaggattgaataacatgctgagtttttcagagaagttacgagctagcgctgaaat tctttgtgacaaaacatcagcaatgccttctcagacacagtcacttcctgatagaccaaagtctacatcatcttacgtga aaggggagaaagagaccaaggaaaaggaacatttgagtcggaaacaaaaactgagaaaaagtcttccatggcgattcaaa gtgaaaaagaaagcaaaagcaggaaaggatgacgtaggaaatgaaggaatcgaaatagaggaaagccttccgttgaaaga agaagcgatagaattacagaaaatcgaggaaaaggagaacccaaaaggaactaaaactgaaaacttggagaagctcctcc aaactacggagaagattaatgaaaagatgacagacaaatcagaagaggacactaaggaattatcccagaaaccggcatca catacatggcctgaaagaaagaaacaaacggattctatagacgtcgtcgacgagggaccatctccgggaaagtcgaaggg acgacctaaagtattgaaaagtttatcttggaagttgaagggcaagaagaaggctcctgaagtgcactcagacatcgaag agccagttgctgtacataaagttacttcaagtcctacaaatacgtcggcaggtcaaagaaaaagtacggatgtaaagcat ggcaatgaggatttgtcaaagatatcaccacaacaggaaaaaccagtaaaatctagtgccaccgaatatccagagtcacg ctctacgacggccgatgacgtcagacaagtgaaggctcaggtgggaggagttaaagaggtagtttatgacaacatcaaat tactagaggaaagagatcacaatttggcaagtttggagaatctggcagaaaatgtccaagaaacgtccactatgttcaaa atggtagctaggagaactcataataaaatgcgttggcggttatggaagtggcgcctgatcctgattggtggaattgtatt tgctgttgttattattgttataattatagtagttgccacactgccatctgacgatgggaatgaagggaacgataaccaaa cgggacaacctattgtaacagtggtgccaagtaccacggcatcatcgcgctaa |
|
Protein
| Protein ID | pfu_aug1.0_4532.1_67001.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4532.1_67001.t1 MPSTEQPRAGLNNMLSFSEKLRASAEILCDKTSAMPSQTQSLPDRPKSTSSYVKGEKETKEKEHLSRKQKLRKSLPWRFK VKKKAKAGKDDVGNEGIEIEESLPLKEEAIELQKIEEKENPKGTKTENLEKLLQTTEKINEKMTDKSEEDTKELSQKPAS HTWPERKKQTDSIDVVDEGPSPGKSKGRPKVLKSLSWKLKGKKKAPEVHSDIEEPVAVHKVTSSPTNTSAGQRKSTDVKH GNEDLSKISPQQEKPVKSSATEYPESRSTTADDVRQVKAQVGGVKEVVYDNIKLLEERDHNLASLENLAENVQETSTMFK MVARRTHNKMRWRLWKWRLILIGGIVFAVVIIVIIIVVATLPSDDGNEGNDNQTGQPIVTVVPSTTASSR |
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