Gene
| Gene Model ID | pfu_aug1.0_4546.1_08934 |
|---|---|
| Locus | scaffold4546.1 : 23156 ... 25667 : + |
| To GenomeBrowser | scaffold4546.1:23156..25667 |
| Genes list of scaffold | scaffold4546.1 |
| Synonym | pfu_aug2.0_709.1_31080 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4546.1_08934.t1 | 2 | 1 | FMO-like | 6 | 60 | 8.7e-30 | 103.4 | 3.2e-14 | 1.6e-10 | 39.8 |
| pfu_aug1.0_4546.1_08934.t1 | 2 | 2 | FMO-like | 71 | 181 | 8.7e-30 | 103.4 | 8.0e-21 | 4.0e-17 | 61.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4546.1_08934.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4546.1_08934.t1 atgcctgacattgcggacatggagaagtttgaaggcaagatcattcacagcagggattatcgccacatagaatcatttgc tggccagaaggtggcggtactaggcatgcattactcaggggaggacatcgcaatacagatcatggaaaaagcaaaaaggg tctacgcttgccatcgaagacaaaccatgtcgccatctttcccagaatcaatcattcagaaacccacaatagtacgcatg acagaaagaaatgcagtttttgccgacggaacggaagcggaaatcgatgcccttatatgttgtaccggatttaaatacaa gtttcctttccttcaagaaggactaattgatatagaaaacgagagggttacgcccctttataagcacatggttcatatag actacccaagcttagttttcgttggcattcccaagcagtggaatcatttcccacatattcacgaacaatcacgagtagca gttgccgttcttgacggcacggcgccacttccgtcaaaagaggaaatgagaaaagagagcgacgatgagtaccttcgttt attagaggaggggaaaccgctacgatacgcccatttctttggggatggggatagacaatggcgattcaacaaagaactag cggcatgggctggaattgaaccccttccacccgtgatggagaaactgaatgacttcgtcatgcttgagagatttaacaac ctcctcggtttcaatcagatgtgttacaaaatcactggaccagattcatttgaaatcatagagaagtag |
|
Protein
| Protein ID | pfu_aug1.0_4546.1_08934.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4546.1_08934.t1 MPDIADMEKFEGKIIHSRDYRHIESFAGQKVAVLGMHYSGEDIAIQIMEKAKRVYACHRRQTMSPSFPESIIQKPTIVRM TERNAVFADGTEAEIDALICCTGFKYKFPFLQEGLIDIENERVTPLYKHMVHIDYPSLVFVGIPKQWNHFPHIHEQSRVA VAVLDGTAPLPSKEEMRKESDDEYLRLLEEGKPLRYAHFFGDGDRQWRFNKELAAWAGIEPLPPVMEKLNDFVMLERFNN LLGFNQMCYKITGPDSFEIIEK |
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