Gene
| Gene Model ID | pfu_aug1.0_45500.1_27105 |
|---|---|
| Locus | scaffold45500.1 : 1 ... 14413 : - |
| To GenomeBrowser | scaffold45500.1:1..14413 |
| Genes list of scaffold | scaffold45500.1 |
| Synonym | pfu_aug2.0_842.1_07938 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_45500.1_27105.t1 | 1 | 1 | FAT | 95 | 170 | 8.9e-06 | 24.9 | 8.3e-09 | 1.4e-05 | 24.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_45500.1_27105.t1 | gi|260831360|ref|XP_002610627.1| | hypothetical protein BRAFLDRAFT_134106 [Branchiostoma floridae] | 1.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_45500.1_27105.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_45500.1_27105.t1 atatcccagaatccctttgttttgatcttatttatgccttcttacaaactattggtgccggtgaagaaaggtctttgact agcgacctaatgagccagtgttatgttgaagacctcagctcattatctcaaaatatgcaagttatgctttctttaaacaa ttttagtcgaaattcttctgttgtggagtcatttgtaactgcagtttgccaacaaacgggaaaagtactgaacagtgaac ataaaaccaatcttgccttgttgatgttgaattacaaagctgacaaagttatacaatcagttaatcaaacttcagcagca ataaaatctataaaatcattgtttaaatcagtactcaaagagccagaaaacagggaaaatgttgacatttggatgagata tgcacaactactgtggaaatgtggtcaaaatcaggaggcaataggcattttagagatggcaatatctcttctaggaccaa agaaagggcaggatgtgattcagatgtacagagtcttagttgaacttttacttggatttacagaggtggagagactatgt tcaatgggtaggaaagaccaaagaaatgatgtgaacccttcaaaagctctgtctgttttgtcttgcttagtagaagggaa acatcagaatgtaaaaaagtatgagtctgtcagtcccatcgccattttgaaatgtggtaaaactttggagactttaacca atgcatcatggcttaaaattcaggaagaaattggagaagatggcaatttgtgcttgaggcgttacttagaatgtgtgaag tgtaaagcattgtttgagtacattaatacttcatcaaagattgatacagcgacaagtgttttaaaccaagctcttgtaga gatgtataaatttgctgacagccacagtgtctcaataagtgaccttgacccttgcaatgcttctgataaagtgacaggga cagtctccaaactcttatatgacatattcaaatataaagtgaggcttgttcaacatcatatgaacctcagcagttatcct ctacaaaatttacgcagtgtgatcgatgcagcgttggaactgttccctaatgactcttgctttcttcaagcattcttgga ctgcgagaaaggttcccattttctgggaagagtggatcgttacttcagtagaagtctaagcagagttacttcccttgttc ctgtagtgtatgctgtgatgtcacagttagaaagaatgatggttgacgatacacaggttccaaacactggtgcattaaac agagtacgtgcgtacttagagaggggtctagaaagcaaagagatccaacactgcccattactgtggagactgtatttaca actagaggctaatattaagtctttgtggaatacagttatttcccacttgggacggtatctgacgtag |
|
Protein
| Protein ID | pfu_aug1.0_45500.1_27105.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_45500.1_27105.t1 IPESLCFDLIYAFLQTIGAGEERSLTSDLMSQCYVEDLSSLSQNMQVMLSLNNFSRNSSVVESFVTAVCQQTGKVLNSEH KTNLALLMLNYKADKVIQSVNQTSAAIKSIKSLFKSVLKEPENRENVDIWMRYAQLLWKCGQNQEAIGILEMAISLLGPK KGQDVIQMYRVLVELLLGFTEVERLCSMGRKDQRNDVNPSKALSVLSCLVEGKHQNVKKYESVSPIAILKCGKTLETLTN ASWLKIQEEIGEDGNLCLRRYLECVKCKALFEYINTSSKIDTATSVLNQALVEMYKFADSHSVSISDLDPCNASDKVTGT VSKLLYDIFKYKVRLVQHHMNLSSYPLQNLRSVIDAALELFPNDSCFLQAFLDCEKGSHFLGRVDRYFSRSLSRVTSLVP VVYAVMSQLERMMVDDTQVPNTGALNRVRAYLERGLESKEIQHCPLLWRLYLQLEANIKSLWNTVISHLGRYLT |
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