Gene
| Gene Model ID | pfu_aug1.0_456.1_43678 |
|---|---|
| Locus | scaffold456.1 : 4407 ... 14945 : - |
| To GenomeBrowser | scaffold456.1:4407..14945 |
| Genes list of scaffold | scaffold456.1 |
| Synonym | pfu_aug2.0_8.1_26638 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_456.1_43678.t1 | 1 | 1 | Ca_chan_IQ | 66 | 98 | 1.5e-19 | 68.8 | 1.8e-23 | 2.7e-19 | 68.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_456.1_43678.t1 | gi|29378315|gb|AAO83839.1|AF484080_1 | voltage-dependent L-type calcium channel alpha-1 subunit isoform b [Lymnaea stagnalis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_456.1_43678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_456.1_43678.t1 atgaacatgccgttgaacagtgatggtacggtaatgttcaatgcaaccctgtttgccttggtacgcacatctttaaaaat caaaacagaaggaaatatagacgatgcaaatgaggatctgcgacgagtaattaaaaccatctggaagagaacaagtccaa agttactggaccaggttgtcccgcctgctggaagagaggacgatgtcactgtaggaaaattctatgcaacatttcttata caagactatttccgccgctttaagaagaggaaggagcagatgcagaagatccagaagggtcaggagcatactaacgcctt acaagctggtctacgtgccgtgcatgatctaggcccagagatcaggagagctatctcagggaatctcgatgaagaggaat tcgccgataaagatgtagaagaacctatgcacaggagaaatcacagcttgtttggtactgtaatgaatgctcttgcgggt gtccataaaactgccttgccatttgccggccgaactcagtctctccttatcaactgcaaccaaactccaaagatttcccc cgccaactctttccacagccctcataccaacctctctccacaaaactcacttaatggtaaagtaacacctgctgatagct gtaatcacctcagtgtggagcaacgcaatgctataaatagatctccgtcgccgctagctcccatcaaaatatctccagtt atgaatgactccaggagaccaagccatgctagtggtgtatcatcaactaccgctgattctcacagagaacccactcccca cagcccggctagcttcacaagtcaaaccacacacaacacacacgagtctgatggtgatatacctcacactaactgggaac agaccaatgatgttagatccaccgacaaacaaaactggatcaataaatcaccgcagcaagagattacaaaaaagcagggc atttatgtctacagagatcttccacaagaggatagtgactatgagagagagcacacccctccaactcctccccccaggaa actgagcaggagaggcgcttcccttagacttgcctgcataggaaaacaacagagtgatgaaaatcccctcatgaaaaaaa tagcagaacctctaaaaatagctcaaacccaggctatggctgtagcaggcttgaccagtgacggccaacatcggcctaca gaatacccccaggtgctacccactcccccaaactccccagggagagtccgctcctacctcaatgcagggcacaacataga cacagcaaggcagcatatgcatcgagccagtgactcggctgttcaggattccactgggccatattcccgagcaggtcctc ttgtcattcctaattacgttatatcccagcaaaaccgacaacattcaccaggaaatttacatcaccttaatcaacatttg aaaagcagtgcggaaagtttggtagaaaaggtattagctgaggaaggtttaaacagatatgtggatgccaggactttaca aagggaaatagcagaagccaatgatatgacagaagaggatctcaatatggccgctcggctgttaacaaccccgacgagag aaaattctggtcagaatacaaaaagtccatactaccatctaggtgggtacagtgcacaagaactgaaggattataaccag tattctgcaactgataacctaaggaatcgtcataaacattacagtgacagttacgaagactcaagtgacgaacaaatggt atttagtacatctttatag |
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Protein
| Protein ID | pfu_aug1.0_456.1_43678.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_456.1_43678.t1 MNMPLNSDGTVMFNATLFALVRTSLKIKTEGNIDDANEDLRRVIKTIWKRTSPKLLDQVVPPAGREDDVTVGKFYATFLI QDYFRRFKKRKEQMQKIQKGQEHTNALQAGLRAVHDLGPEIRRAISGNLDEEEFADKDVEEPMHRRNHSLFGTVMNALAG VHKTALPFAGRTQSLLINCNQTPKISPANSFHSPHTNLSPQNSLNGKVTPADSCNHLSVEQRNAINRSPSPLAPIKISPV MNDSRRPSHASGVSSTTADSHREPTPHSPASFTSQTTHNTHESDGDIPHTNWEQTNDVRSTDKQNWINKSPQQEITKKQG IYVYRDLPQEDSDYEREHTPPTPPPRKLSRRGASLRLACIGKQQSDENPLMKKIAEPLKIAQTQAMAVAGLTSDGQHRPT EYPQVLPTPPNSPGRVRSYLNAGHNIDTARQHMHRASDSAVQDSTGPYSRAGPLVIPNYVISQQNRQHSPGNLHHLNQHL KSSAESLVEKVLAEEGLNRYVDARTLQREIAEANDMTEEDLNMAARLLTTPTRENSGQNTKSPYYHLGGYSAQELKDYNQ YSATDNLRNRHKHYSDSYEDSSDEQMVFSTSL |
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