Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_4569.1_08941
Locus scaffold4569.1 : 9228 ... 20105 : -
To GenomeBrowser scaffold4569.1:9228..20105
Genes list of scaffold scaffold4569.1
Synonym pfu_aug2.0_1821.1_05259

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_4569.1_08941.t1 1 1 Glyco_transf_10 72 181 1.5e-14 53.3 1.3e-18 2.0e-14 52.9

Transcript
Transcript IDpfu_aug1.0_4569.1_08941.t1
Definition-
>pfu_aug1.0_4569.1_08941.t1
atgactaagcccgggtttaaccaaccacggaaagccatagagtcatcgtggacttcgacacagaaagccgtagaattccc
gctgacctttacagagaaaaacgttagttcatcgaaaacatcgacacagaaggacattggttcatcgcggtcctcgacaa
agaaaaccgttggttcattgatttcaaccacacagtatgttgcgaacttatcttggattacaacgtcgacggttaaacaa
actccaatgccaaattctacggaaactgaattccccaacaaaaagacaaaagactcacagcgacctcctattttgattct
cttgtggcgtcctctttataaggatgtgaaagatgtcgagggacaaatggcgcagcaatgtccaaaacacaattgccatt
ttacatctgaccggaaatatatgccggaagcggatgctgtagtgattgaggtcgagggattttacaatctccctccaaaa
gcaaagatgggtcaagtttggatttatgcagacatggaatcaccagcatatatggagcaagtcaagctacaaagacttcg
ttttgaggacaagaaccactcaaccataggtgtttctgttagcgactga

Protein
Protein IDpfu_aug1.0_4569.1_08941.t1
Definition-
>pfu_aug1.0_4569.1_08941.t1
MTKPGFNQPRKAIESSWTSTQKAVEFPLTFTEKNVSSSKTSTQKDIGSSRSSTKKTVGSLISTTQYVANLSWITTSTVKQ
TPMPNSTETEFPNKKTKDSQRPPILILLWRPLYKDVKDVEGQMAQQCPKHNCHFTSDRKYMPEADAVVIEVEGFYNLPPK
AKMGQVWIYADMESPAYMEQVKLQRLRFEDKNHSTIGVSVSD

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495