Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_457.1_43685
Locus scaffold457.1 : 40954 ... 45715 : -
To GenomeBrowser scaffold457.1:40954..45715
Genes list of scaffold scaffold457.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_457.1_43685.t1 1 1 CHB_HEX_C 5 73 1.1e-06 28.4 1.7e-10 1.2e-06 28.1

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
mantlePallium 2

Transcript
Transcript IDpfu_aug1.0_457.1_43685.t1
Definition-
>pfu_aug1.0_457.1_43685.t1
atgggatataaataccatatacctctaccaggagcaatgattaaaggagataagatgcacgtgaacacggcgttccccgg
actgcaggtggaatacagcatggataacatgaacacgtggaaagttgctgatggacccgtggatgtaggagacagcctac
ttatccatctcagaacaagatcagcagacggacgtcggtacagtcgtacagtttctgtggcgcctgccatgacccgttat
tatcagcccctctggcaaatcccattctttcagaagtacctcatgtatttatactga

Protein
Protein IDpfu_aug1.0_457.1_43685.t1
Definition-
>pfu_aug1.0_457.1_43685.t1
MGYKYHIPLPGAMIKGDKMHVNTAFPGLQVEYSMDNMNTWKVADGPVDVGDSLLIHLRTRSADGRRYSRTVSVAPAMTRY
YQPLWQIPFFQKYLMYLY

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