Gene
Gene Model ID | pfu_aug1.0_45707.1_48602 |
---|---|
Locus | scaffold45707.1 : 1 ... 21233 : + |
To GenomeBrowser | scaffold45707.1:1..21233 |
Genes list of scaffold | scaffold45707.1 |
Synonym | pfu_aug2.0_156.1_20344 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_45707.1_48602.t1 | 3 | 1 | Kelch_3 | 5 | 18 | 3.2e-13 | 49.4 | 0.0012 | 3.0 | 8.1 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 1 | Kelch_5 | 7 | 45 | 2.5e-08 | 33.6 | 2.6e-09 | 6.5e-06 | 25.9 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 1 | Kelch_4 | 11 | 54 | 2.1e-17 | 62.6 | 9.6e-14 | 2.4e-10 | 40.0 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 1 | Kelch_6 | 12 | 53 | 5.0e-06 | 26.4 | 3.2e-07 | 0.00079 | 19.5 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 1 | Kelch_1 | 20 | 54 | 2.1e-06 | 27.1 | 4.0e-07 | 0.00099 | 18.6 |
pfu_aug1.0_45707.1_48602.t1 | 3 | 2 | Kelch_3 | 22 | 69 | 3.2e-13 | 49.4 | 5.3e-12 | 1.3e-08 | 34.7 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 2 | Kelch_4 | 61 | 84 | 2.1e-17 | 62.6 | 8.4e-08 | 0.00021 | 21.0 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 2 | Kelch_5 | 61 | 82 | 2.5e-08 | 33.6 | 0.006 | 15.0 | 5.6 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 2 | Kelch_6 | 65 | 80 | 5.0e-06 | 26.4 | 0.012 | 30.0 | 5.0 |
pfu_aug1.0_45707.1_48602.t1 | 2 | 2 | Kelch_1 | 66 | 87 | 2.1e-06 | 27.1 | 0.0019 | 4.8 | 6.8 |
pfu_aug1.0_45707.1_48602.t1 | 3 | 3 | Kelch_3 | 74 | 82 | 3.2e-13 | 49.4 | 0.033 | 83.0 | 3.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_45707.1_48602.t1 | gi|110645840|gb|AAI19568.1| | Kelch domain containing 1 [Mus musculus] | 3.0e-23 |
Transcript
Transcript ID | pfu_aug1.0_45707.1_48602.t1 |
---|---|
Definition | - |
>pfu_aug1.0_45707.1_48602.t1 attgacaacagagggtaacataccagagggtcgttcatggcattccctttctgcactggacgatggtcgtctgtttatgt atggtggatttaacactagctgccagcctctcagtgatgcttggacccttgaccttttgaccttacaatggagccagctg aagcatgtacctggtgatcgtccccgtctctggcataccgcctgcgtcacaccgtcacaggaagtggtcattcatggagg atgctccaacaatattcttgattaccaaatacaaacagaacatcgtagtgatgtgatacatatacagacacagccttact cacttctcagatag |
Protein
Protein ID | pfu_aug1.0_45707.1_48602.t1 |
---|---|
Definition | - |
>pfu_aug1.0_45707.1_48602.t1 LTTEGNIPEGRSWHSLSALDDGRLFMYGGFNTSCQPLSDAWTLDLLTLQWSQLKHVPGDRPRLWHTACVTPSQEVVIHGG CSNNILDYQIQTEHRSDVIHIQTQPYSLLR |