Gene
| Gene Model ID | pfu_aug1.0_4590.1_30729 |
|---|---|
| Locus | scaffold4590.1 : 53426 ... 61124 : + |
| To GenomeBrowser | scaffold4590.1:53426..61124 |
| Genes list of scaffold | scaffold4590.1 |
| Synonym | pfu_aug2.0_599.1_30966 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4590.1_30729.t1 | 5 | 1 | WD40 | 81 | 98 | 9.9e-15 | 53.7 | 2.9e-05 | 0.14 | 12.0 |
| pfu_aug1.0_4590.1_30729.t1 | 5 | 2 | WD40 | 115 | 151 | 9.9e-15 | 53.7 | 3.5e-05 | 0.17 | 11.7 |
| pfu_aug1.0_4590.1_30729.t1 | 5 | 3 | WD40 | 166 | 193 | 9.9e-15 | 53.7 | 0.0048 | 24.0 | 5.0 |
| pfu_aug1.0_4590.1_30729.t1 | 5 | 4 | WD40 | 208 | 233 | 9.9e-15 | 53.7 | 6.1e-05 | 0.3 | 11.0 |
| pfu_aug1.0_4590.1_30729.t1 | 5 | 5 | WD40 | 242 | 277 | 9.9e-15 | 53.7 | 0.00066 | 3.3 | 7.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4590.1_30729.t1 | gi|297271913|ref|XP_002800333.1| | PREDICTED: WD repeat-containing protein 16-like isoform 3 [Macaca mulatta] | 6.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_4590.1_30729.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4590.1_30729.t1 atggctgaccgagatcagttttatgtcggaacttccaaatctcagatattcaagtttaaatcagatgaaagtgctaatgt gaacgtgcctgaaggtgtagaattactgaggcatggagtgatggaagcattcgtttatatgattttgacgtccaaaatga aaacgaaaaatcaggccttgttgagaaattttcacataaagtccatagcaagagtgtatcggcccnttgccgtcatgtca gatggtaaaagggctgtgagtggaagtgatgatggagaggtacatatctgggaagtcatttctgacattgatgccggaaa taatgaaatcatctctttcaaacgtttgggaacaatgacaggagatgaaaatcgtgtagaggaattaaagataagtttca acgacgaggaatgcgtgtcactaagcgccaaaggcacatgcattatttgggatttagttactcataaaaggaaaagaaca atattgacaaacactgaagtcaacgctgtatgttatggaggagataatgatagacaaattataacgggaggaacaaacgg aaagcttcagtactggaatattgaaaatggcactcttatccgagaagtacttatatcgggtggttcaattaatgctattg atatgacttcaacgaagaaatatgttatcactggaggcgaagacaaagtattgaaagttctggactacgcaggaggacac acattatttactgggatcggtcacagtgctcctatcatgaaggtcaaaatttacgagaagaacagttccatcgtcagtgt tgactcggaaggtgtcatcttaatctggaaattcccgcttttgtcttga |
|
Protein
| Protein ID | pfu_aug1.0_4590.1_30729.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4590.1_30729.t1 MADRDQFYVGTSKSQIFKFKSDESANVNVPEGVELLRHGVMEAFVYMILTSKMKTKNQALLRNFHIKSIARVYRPXAVMS DGKRAVSGSDDGEVHIWEVISDIDAGNNEIISFKRLGTMTGDENRVEELKISFNDEECVSLSAKGTCIIWDLVTHKRKRT ILTNTEVNAVCYGGDNDRQIITGGTNGKLQYWNIENGTLIREVLISGGSINAIDMTSTKKYVITGGEDKVLKVLDYAGGH TLFTGIGHSAPIMKVKIYEKNSSIVSVDSEGVILIWKFPLLS |
|