Gene
Gene Model ID | pfu_aug1.0_4592.1_67023 |
---|---|
Locus | scaffold4592.1 : 1165 ... 6795 : - |
To GenomeBrowser | scaffold4592.1:1165..6795 |
Genes list of scaffold | scaffold4592.1 |
Synonym | NA |
Manual annotation
Study field | signal molecules |
---|---|
Gene name | O-fut1 |
Description | Blast hits to varios organisms O-fut1. Best hits to Bombyx mori O-fut1 gene. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4592.1_67023.t1 | 1 | 1 | O-FucT | 2 | 111 | 4.6e-19 | 68.7 | 1.1e-22 | 5.6e-19 | 68.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4592.1_67023.t1 | gi|170055678|ref|XP_001863689.1| | O-fucosyltransferase [Culex quinquefasciatus] | 4.0e-30 |
Transcript
Transcript ID | pfu_aug1.0_4592.1_67023.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4592.1_67023.t1 atgatgtttgccgccgcccagtgtctggggtacaggggggagaaaggcaaggctaccatggagatgtgctaccctcctga tgatgtcattgttaaacaagtcaaagctgccgtcaaaaaacacaaagccgttggcgtcttcatagccacggatagtagag atctcatagacaagttctcaaagtctatgaaaaaggttaaatttgtcaagctctccaaatccaatcctcatgttgatcta gccattttaggacaagctacgcattacattggaaattgtatatcaacattttctgccatagctacaagagaacgaaatac aaagggaaaaactacagaattttgggcatttaaagaaaaaaccagcatgaagaattatgatgtttatttctcagtttag |
Protein
Protein ID | pfu_aug1.0_4592.1_67023.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4592.1_67023.t1 MMFAAAQCLGYRGEKGKATMEMCYPPDDVIVKQVKAAVKKHKAVGVFIATDSRDLIDKFSKSMKKVKFVKLSKSNPHVDL AILGQATHYIGNCISTFSAIATRERNTKGKTTEFWAFKEKTSMKNYDVYFSV |