Gene
Gene Model ID | pfu_aug1.0_4592.1_67025 |
---|---|
Locus | scaffold4592.1 : 46846 ... 51728 : + |
To GenomeBrowser | scaffold4592.1:46846..51728 |
Genes list of scaffold | scaffold4592.1 |
Synonym | pfu_aug2.0_324.1_13989 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4592.1_67025.t1 | 1 | 1 | IER | 2 | 262 | 2.5e-26 | 93.3 | 5.3e-30 | 7.8e-26 | 91.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4592.1_67025.t1 | gi|241696779|ref|XP_002413098.1| | conserved hypothetical protein [Ixodes scapularis] | 7.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_4592.1_67025.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4592.1_67025.t1 atgaacaccgatgcacagaggttgattgctctttcccttggaaaaatagcagcatccagacaacaacgtggagggattaa tttacataaaaatttactcgtggcgagtgtgttgcataaagcaaggaccacttacatgatggagaatctacaaacggttt tagcaaacaggaaagctcaatcagaagcaagggacattgctcttcagaggcagaaatctcagataagtagcgagaactct tcacaattaaattctacgaattccaaagataaagcacgtcatgacgcgcagacggaagccaaaaggtcacgagttgaact tgaaacacccagagtcagtgaagcgagtaaacaagaggaggacaaagaaaatgcccctcccaagtgtgctagactggaat gtgaaaacacaaaggaggataaattaccccaggacattaacaatgaggatagttgtagtacccccttacaatcaggacag tgcactcagaatattggggtcagtgattacgtcagagactcgggatgcgcaaggtgtgctgtgaaacgaaggcgtccatc aagcgatgcggagacacaagaggattatgaaaatgaacttgaagttaaaaaagcgagattggaaccggaggttgaaagtg aacatatatctcaggactcatctgtagaacagatgcaaaccgaaagttctcaaattacaaacttagtcagtattttcaat gcagggttcggcggtctttgttccgattccgagaaagacccttgtgagaaagacagtaacaataacgagaagtcattcac ccaacctcaggataacatattctataatgcagtacaatcaatgaacagcttctcaatgaaagacaatgcctccgtgtctt gtgctactcagatgattgacagtaaaatagaagctgtttctatagcgacgccgattgcattgaccgtttga |
Protein
Protein ID | pfu_aug1.0_4592.1_67025.t1 |
---|---|
Definition | - |
>pfu_aug1.0_4592.1_67025.t1 MNTDAQRLIALSLGKIAASRQQRGGINLHKNLLVASVLHKARTTYMMENLQTVLANRKAQSEARDIALQRQKSQISSENS SQLNSTNSKDKARHDAQTEAKRSRVELETPRVSEASKQEEDKENAPPKCARLECENTKEDKLPQDINNEDSCSTPLQSGQ CTQNIGVSDYVRDSGCARCAVKRRRPSSDAETQEDYENELEVKKARLEPEVESEHISQDSSVEQMQTESSQITNLVSIFN AGFGGLCSDSEKDPCEKDSNNNEKSFTQPQDNIFYNAVQSMNSFSMKDNASVSCATQMIDSKIEAVSIATPIALTV |