Gene
| Gene Model ID | pfu_aug1.0_4592.1_67025 |
|---|---|
| Locus | scaffold4592.1 : 46846 ... 51728 : + |
| To GenomeBrowser | scaffold4592.1:46846..51728 |
| Genes list of scaffold | scaffold4592.1 |
| Synonym | pfu_aug2.0_324.1_13989 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4592.1_67025.t1 | 1 | 1 | IER | 2 | 262 | 2.5e-26 | 93.3 | 5.3e-30 | 7.8e-26 | 91.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4592.1_67025.t1 | gi|241696779|ref|XP_002413098.1| | conserved hypothetical protein [Ixodes scapularis] | 7.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4592.1_67025.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4592.1_67025.t1 atgaacaccgatgcacagaggttgattgctctttcccttggaaaaatagcagcatccagacaacaacgtggagggattaa tttacataaaaatttactcgtggcgagtgtgttgcataaagcaaggaccacttacatgatggagaatctacaaacggttt tagcaaacaggaaagctcaatcagaagcaagggacattgctcttcagaggcagaaatctcagataagtagcgagaactct tcacaattaaattctacgaattccaaagataaagcacgtcatgacgcgcagacggaagccaaaaggtcacgagttgaact tgaaacacccagagtcagtgaagcgagtaaacaagaggaggacaaagaaaatgcccctcccaagtgtgctagactggaat gtgaaaacacaaaggaggataaattaccccaggacattaacaatgaggatagttgtagtacccccttacaatcaggacag tgcactcagaatattggggtcagtgattacgtcagagactcgggatgcgcaaggtgtgctgtgaaacgaaggcgtccatc aagcgatgcggagacacaagaggattatgaaaatgaacttgaagttaaaaaagcgagattggaaccggaggttgaaagtg aacatatatctcaggactcatctgtagaacagatgcaaaccgaaagttctcaaattacaaacttagtcagtattttcaat gcagggttcggcggtctttgttccgattccgagaaagacccttgtgagaaagacagtaacaataacgagaagtcattcac ccaacctcaggataacatattctataatgcagtacaatcaatgaacagcttctcaatgaaagacaatgcctccgtgtctt gtgctactcagatgattgacagtaaaatagaagctgtttctatagcgacgccgattgcattgaccgtttga |
|
Protein
| Protein ID | pfu_aug1.0_4592.1_67025.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4592.1_67025.t1 MNTDAQRLIALSLGKIAASRQQRGGINLHKNLLVASVLHKARTTYMMENLQTVLANRKAQSEARDIALQRQKSQISSENS SQLNSTNSKDKARHDAQTEAKRSRVELETPRVSEASKQEEDKENAPPKCARLECENTKEDKLPQDINNEDSCSTPLQSGQ CTQNIGVSDYVRDSGCARCAVKRRRPSSDAETQEDYENELEVKKARLEPEVESEHISQDSSVEQMQTESSQITNLVSIFN AGFGGLCSDSEKDPCEKDSNNNEKSFTQPQDNIFYNAVQSMNSFSMKDNASVSCATQMIDSKIEAVSIATPIALTV |
|