Gene
| Gene Model ID | pfu_aug1.0_4615.1_16447 |
|---|---|
| Locus | scaffold4615.1 : 35717 ... 48135 : - |
| To GenomeBrowser | scaffold4615.1:35717..48135 |
| Genes list of scaffold | scaffold4615.1 |
| Synonym | pfu_aug2.0_56.1_20128 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | zf-RING_2 | 21 | 67 | 9.7e-08 | 31.7 | 1.7e-10 | 2.0e-07 | 30.7 |
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | zf-C3HC4_3 | 21 | 69 | 6.6e-06 | 25.6 | 1.1e-08 | 1.3e-05 | 24.7 |
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | zf-C3HC4 | 22 | 66 | 6.3e-09 | 35.3 | 1.1e-11 | 1.3e-08 | 34.3 |
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | zf-C3HC4_2 | 22 | 66 | 3.8e-07 | 30.0 | 7.3e-10 | 8.3e-07 | 28.9 |
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | SH2 | 137 | 224 | 1.6e-18 | 66.2 | 2.7e-21 | 3.1e-18 | 65.3 |
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | Pkinase_Tyr | 266 | 512 | 0.0 | 284.4 | 0.0 | 0.0 | 284.0 |
| pfu_aug1.0_4615.1_16447.t1 | 1 | 1 | Pkinase | 266 | 509 | 0.0 | 171.6 | 0.0 | 0.0 | 171.1 |
Transcript
| Transcript ID | pfu_aug1.0_4615.1_16447.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4615.1_16447.t1 atggccaggtctaccagcaatagaaccagtctcaaagaaaaactgcaagaagagtttctatcttgtaagatctgcctgga gcctttcatcaaacctaaagctttaccctgtctacacagcttctgtgaacattgcttacgtgattatgtacggcgacacc ctggggagaaacctggacattttccttgccctatgtgccgtaaggacacacccatcccgtgtgggggtatcggtgatttc acggacaatttcttgttgttaagtttatcggatacattagatgaagatgaggatcactggactatccctcagcactcccc tgggggtgtacgtagtagtactcatatatccccaccccggacactagccccacccacaccacaggaacaacatctacgca cttacgattggtactttggaaaagtttcccgtcatgcatcagaggattggttattaagccccggctatcctaaaggcacg ttcctcctgcggcagggagaggcagcccctgatacgtatactttatctgttcgtgactgtgatgaattgagaggttatct agtgaaacattataagatttacactggacgcacaaatgactcaattgtagaattctattatattactccgaaaagaacat ttagatctctgttggatttagttacacattacacagtgtctgcagatggattatgctgtaagcttgcacagccctgtata aaacctcgatctttgatatgggcctttgatcggggaaaatctgatgagtttggtactacccgagatactatattactaat caggaaactcggtagtggccagtttgcagaggtctggcttggcaactggcacagttcaagggaagtggctatcaaaatgc agaagaaggattcggtaacgactgcagcatttctagatgagagtcagatactgaaacagttacagcatcccaatataata cgcctgttggctgtgtccagcgaagccgagcccatatacctcattatggagtacatgccccaggggcgactgtctatgta cctaagggagggtaatggcaaggacctaggatccacacagctactttggatagctgctcaaattgctgaagggatggcct atatggagaaagagaaatttgttcatcggaaccttggtgctagaaacattttagttggggatggcaatgttgttaaaata gcaggatttggcatgacaaaggttgtagatgatcctgattttaatttccgaagaggcttgaagatggccattaagtggat ggctccagaagtgttactttgtaacaaatacagtacaaaggcagatgtttggtcctttggtatagtacttatagaaatct ttacctacggcaaggagccttatgatggaatgggttcaaaagaagcctttcagcatgtgcaacagaactatcgaatacct cgtcctgataactgtccctcggaagtgtacgatgtcattcttacgtgttggaatgccaatcctccatcacgaccaacgtt tgactatctgaacacgtacttacacgactttcagtcctcatcgtga |
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Protein
| Protein ID | pfu_aug1.0_4615.1_16447.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4615.1_16447.t1 MARSTSNRTSLKEKLQEEFLSCKICLEPFIKPKALPCLHSFCEHCLRDYVRRHPGEKPGHFPCPMCRKDTPIPCGGIGDF TDNFLLLSLSDTLDEDEDHWTIPQHSPGGVRSSTHISPPRTLAPPTPQEQHLRTYDWYFGKVSRHASEDWLLSPGYPKGT FLLRQGEAAPDTYTLSVRDCDELRGYLVKHYKIYTGRTNDSIVEFYYITPKRTFRSLLDLVTHYTVSADGLCCKLAQPCI KPRSLIWAFDRGKSDEFGTTRDTILLIRKLGSGQFAEVWLGNWHSSREVAIKMQKKDSVTTAAFLDESQILKQLQHPNII RLLAVSSEAEPIYLIMEYMPQGRLSMYLREGNGKDLGSTQLLWIAAQIAEGMAYMEKEKFVHRNLGARNILVGDGNVVKI AGFGMTKVVDDPDFNFRRGLKMAIKWMAPEVLLCNKYSTKADVWSFGIVLIEIFTYGKEPYDGMGSKEAFQHVQQNYRIP RPDNCPSEVYDVILTCWNANPPSRPTFDYLNTYLHDFQSSS |
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