Gene
| Gene Model ID | pfu_aug1.0_4628.1_01781 |
|---|---|
| Locus | scaffold4628.1 : 44186 ... 52403 : + |
| To GenomeBrowser | scaffold4628.1:44186..52403 |
| Genes list of scaffold | scaffold4628.1 |
| Synonym | pfu_aug2.0_210.1_00433 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4628.1_01781.t1 | 2 | 1 | IIGP | 175 | 208 | 3.7e-06 | 26.0 | 3.7e-07 | 0.00032 | 19.6 |
| pfu_aug1.0_4628.1_01781.t1 | 1 | 1 | Dynamin_N | 191 | 332 | 6.5e-18 | 65.1 | 2.3e-20 | 2.0e-17 | 63.5 |
| pfu_aug1.0_4628.1_01781.t1 | 1 | 1 | MMR_HSR1 | 191 | 331 | 2.8e-06 | 27.2 | 1.3e-08 | 1.1e-05 | 25.3 |
| pfu_aug1.0_4628.1_01781.t1 | 2 | 2 | IIGP | 368 | 456 | 3.7e-06 | 26.0 | 0.032 | 27.0 | 3.3 |
| pfu_aug1.0_4628.1_01781.t1 | 1 | 1 | Pkinase | 700 | 972 | 2.66247e-44 | 151.2 | 0.0 | 4.90454e-44 | 150.4 |
| pfu_aug1.0_4628.1_01781.t1 | 1 | 1 | Pkinase_Tyr | 700 | 973 | 7.89996e-41 | 139.8 | 1.59748e-43 | 1.4e-40 | 138.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4628.1_01781.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4628.1_01781.t1 atgtttttgaatctaccgagtgcaactgtacatacctgtaaagcaatcaactctagccagtttacactcaaagaaatagt gaagatgcgctttaaatgttttcaggaacgagatgcggaaccaaagaacaactctgtgaatgaggacaacaaaatgtcag gacagagcaatgatttcaatgtaaaatctgtagacgacatttacaggctacctgacgtggcatcatgcaggacgttggcc aaacaatgggggatgaatctgaagggactgggactgaagtccagagaggactacgtttctcatctggtaaaacattggaa tgaaaaaggagacactgcaagtcacccaaagatattcgaacactttcaggcgaatccaaatgaaggcctcagagatgcca ttgaagtggacaagaaaagtaggaataggatggttgagaaatatgatcaaatcaacgacttcttgaagagactccctccc caatatatgaaaaacctcctcaacatctatcctaatttagccaaagacatagaagatagagccaaggagttaaaatcaag ggagtgtacgattctagtggccggtgagacaggtgccgggaaatcttctttcatcaatctacttctagaaagagagattc ttccatcggcagctctatcgtgctccaagacaatatgtgaaatgaggaagagttcggatggtagatcctttgctgtttgt cattataagtccaatgggggtaaaaaacgtccacccgatctattggacttgaccaaagacggtgcaatcgaagatcttag aaaacgtctgatttatgtggacaacgaagatgaaacaccttttgagaaaattgaagtcaatatgcctttcccgatgttag aggaagggatcgttattgtggatacccctggtattggagagaggagacaagaggggaaaatgcttgagaaatatctgaat aagtccttcggctcaatctatctagtgaatacatctgcagcaggcggggtcaataaaggaaggctgagggacttcctacg tcttgttgtgaatacagcaagcgacgacttcaatccaaatgcttccatcttcattgggaataaaatagacgcagtggacc agaaagaccttgatgaagttcagaggagagtggtttataaactccaagaatgctatcctggcttgaaggacgacaatgtt ttctttatatttcagtcagaaatagtgaagcgatccctctacacactgaaagttgctagaacattagcagcgtcaggcat ggagaagaagcaggaggagatcgacgaaacaaagcagaggatggacctgttggataggaacgcacgccgaaccatagcgg acctcagacgtgatgtacaagacgaggaagaaaatttatggcgccaaattacagaatttttgaggatagcagaggaggtg gacagatgggaggaggaaaaaggaatagtggatagaattaaagatgccatagttgggaaatttcaaaaagagtgtcagat gtatgaggatcagatcagagaaattgaaggagccctcactgatggcgatgttcgaatgataaatgatcttcacaagtcaa tgaagaggcaagctccagtaaaacaactttggcaaaaggcaaataaagctcaaaagggaagtccaaaagaaaagctgggc agtttaggaagcgtcgtcagtagcgcagggggttttgattccagctattttaaatcaatagccaaatcttacaaaggcga aaattctgttcaaaagatgtccgaaatgacagcgaagtacattgacagtatcttcaatggaaatgacctgaagataaaaa tagatcgatttgtccataagtttatcagaggtattgatgttattgcaaagaaaataccagaattcttggaagctgatcgc cagttgatacaaaatatgaaagatgagatagcaaatgcagaaaccaatttgcagaaatttccggatttactacacagggc cgccgtcattcagggagacctagatttgttctatgtccagagggtgatggaaatggatttccgtctacgagatgtggagt ttaatccaagtcaggatttccttggaagtggaagttttgcagatgtatacagaggaaaactgttggtgggaaattataca gaaacggttgctcttaaaatgtcgaaggaatacctgagggagacgaacatctctgatattctgctagaggatcgcacgat gagggagctggatcatgataacatcgtacggtattatggatcaacattaaagcaagatgagggcaaaggtcgtgttcgac tatactggattatggtcatagaattttgcacagatacactcaaaaatttagtgatcgacggggcttttgataatccagcc aaatgtcgtatatactcggtacaagtagatcagatggagttgatggcaggatatgtcaaacagatgtgtgctggcttgag ttatcttcacaagaaggaccttgtgcatcgggacctcaaacttgaaaacattctggtcaatggtgagtttagctccctga aagaaatagctgtcaaaattaccgatgttggattgacaaagggtcagcgcgaattggccggaagtaatgttggatcacca gcttacatggcaccggaagttctgctccaggaaggaatttatgatcgaaaggtggacatctatgcactcggtgtaattct atgggagatatggtacggacttgacgccgccgatcatatacaacagaatttgtttggaaccttggagaaagccgtgaaag gagggttacggccgtctatgagccttcctgagaaaccagtagatgactgggctgtcttgataaaacgttgttgggactat gattcaaaaaagcgtcccgaagccagtgaagttttccgatttttcgatgactttttgaagagttcaagtcctacaaacta a |
|
Protein
| Protein ID | pfu_aug1.0_4628.1_01781.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4628.1_01781.t1 MFLNLPSATVHTCKAINSSQFTLKEIVKMRFKCFQERDAEPKNNSVNEDNKMSGQSNDFNVKSVDDIYRLPDVASCRTLA KQWGMNLKGLGLKSREDYVSHLVKHWNEKGDTASHPKIFEHFQANPNEGLRDAIEVDKKSRNRMVEKYDQINDFLKRLPP QYMKNLLNIYPNLAKDIEDRAKELKSRECTILVAGETGAGKSSFINLLLEREILPSAALSCSKTICEMRKSSDGRSFAVC HYKSNGGKKRPPDLLDLTKDGAIEDLRKRLIYVDNEDETPFEKIEVNMPFPMLEEGIVIVDTPGIGERRQEGKMLEKYLN KSFGSIYLVNTSAAGGVNKGRLRDFLRLVVNTASDDFNPNASIFIGNKIDAVDQKDLDEVQRRVVYKLQECYPGLKDDNV FFIFQSEIVKRSLYTLKVARTLAASGMEKKQEEIDETKQRMDLLDRNARRTIADLRRDVQDEEENLWRQITEFLRIAEEV DRWEEEKGIVDRIKDAIVGKFQKECQMYEDQIREIEGALTDGDVRMINDLHKSMKRQAPVKQLWQKANKAQKGSPKEKLG SLGSVVSSAGGFDSSYFKSIAKSYKGENSVQKMSEMTAKYIDSIFNGNDLKIKIDRFVHKFIRGIDVIAKKIPEFLEADR QLIQNMKDEIANAETNLQKFPDLLHRAAVIQGDLDLFYVQRVMEMDFRLRDVEFNPSQDFLGSGSFADVYRGKLLVGNYT ETVALKMSKEYLRETNISDILLEDRTMRELDHDNIVRYYGSTLKQDEGKGRVRLYWIMVIEFCTDTLKNLVIDGAFDNPA KCRIYSVQVDQMELMAGYVKQMCAGLSYLHKKDLVHRDLKLENILVNGEFSSLKEIAVKITDVGLTKGQRELAGSNVGSP AYMAPEVLLQEGIYDRKVDIYALGVILWEIWYGLDAADHIQQNLFGTLEKAVKGGLRPSMSLPEKPVDDWAVLIKRCWDY DSKKRPEASEVFRFFDDFLKSSSPTN |
|