Gene
| Gene Model ID | pfu_aug1.0_46464.1_70586 |
|---|---|
| Locus | scaffold46464.1 : 266 ... 4549 : + |
| To GenomeBrowser | scaffold46464.1:266..4549 |
| Genes list of scaffold | scaffold46464.1 |
| Synonym | pfu_aug2.0_110.1_00256 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_46464.1_70586.t1 | 2 | 1 | bZIP_2 | 119 | 170 | 1.7e-07 | 30.9 | 2.4e-11 | 1.7e-07 | 30.9 |
| pfu_aug1.0_46464.1_70586.t1 | 2 | 2 | bZIP_2 | 398 | 411 | 1.7e-07 | 30.9 | 0.057 | 430.0 | 0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_46464.1_70586.t1 | gi|55250234|gb|AAH85591.1| | Zgc:77060 protein [Danio rerio] | 1.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 2 |
Transcript
| Transcript ID | pfu_aug1.0_46464.1_70586.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46464.1_70586.t1 atgccaaatttttgggattcccctaatcgcaccgtcgtcaacttttgttacatcgatgtcaacttttgctacatcaatat aacgaattgtaatgtgatggaaaagtacctgttacacaatttaatgatggattacgatttaatttaccacttttcttccg ccaatacatgtatcacacatgaatacaatgcaatggagaaatatagcatatggtcggtgactatggctcagaaagaggac aaaacactaacggaaccttggtacatatccgatgacatcgctcttgaaattgacacttccctgacgacacttgtatcgaa gcggaaagcaaagcgtatcacccctgagagtgacaaagatcaaagatactggaataaacgacagcgcaacaatgtggcag ctaagagatcacgtgagaacaaacgaaaaatagaatatgcaatcagaaataaggtacttgtcctggtggaagaaaatgcc ttgttgaagaaagaaatatctgtactgcgatcgaaattcggcatacctgacgacaaaagtatcttgacagaggaagaaag agaaaaatgcattcaagctgctcaagaaggatttcaaaaaacattagggagtagaaagtcgtctccactgccctcagact cctgtctgtcaccgccaagaggccagtcaccaactgttcatatagaaaatttagaacaaaactccaatttgagagaggaa agcagctccagtgactatgagatgaaaacttgtacaccggtgtaccccacatctaatcctatcccatgctcttggtcgta ttctccagttgcgagttcaccggaacctcctcctgcgcatgcatctatcccttcttccgttcgggatgcctcagacaata tggtaatgtcaaatgctcatcacaataatcattggaaattcggaaatgtttcaaatcatcaccatcatcatcatcatacg cagcaatactacccaccatattcacactatcaacaaggctactatgcatgcgcaccagacgataattcaacttctgctcc agctgatttgtcactaagaggctcaaaatcctcacattatgaaaacaggacaagttgtcctcatgacctgaatccacgat cagcatgtcatgctgtagaaccatcggagaatgctcacatatcaggagtgaattcagaccccttacattgtgaaaacgag agtttaaggacaaaattactccaattatcagctcaagtggacgaaatgaaagccctcatcttgaaatcataa |
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Protein
| Protein ID | pfu_aug1.0_46464.1_70586.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46464.1_70586.t1 MPNFWDSPNRTVVNFCYIDVNFCYINITNCNVMEKYLLHNLMMDYDLIYHFSSANTCITHEYNAMEKYSIWSVTMAQKED KTLTEPWYISDDIALEIDTSLTTLVSKRKAKRITPESDKDQRYWNKRQRNNVAAKRSRENKRKIEYAIRNKVLVLVEENA LLKKEISVLRSKFGIPDDKSILTEEEREKCIQAAQEGFQKTLGSRKSSPLPSDSCLSPPRGQSPTVHIENLEQNSNLREE SSSSDYEMKTCTPVYPTSNPIPCSWSYSPVASSPEPPPAHASIPSSVRDASDNMVMSNAHHNNHWKFGNVSNHHHHHHHT QQYYPPYSHYQQGYYACAPDDNSTSAPADLSLRGSKSSHYENRTSCPHDLNPRSACHAVEPSENAHISGVNSDPLHCENE SLRTKLLQLSAQVDEMKALILKS |
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