Gene
| Gene Model ID | pfu_aug1.0_465.1_00316 |
|---|---|
| Locus | scaffold465.1 : 38790 ... 52635 : - |
| To GenomeBrowser | scaffold465.1:38790..52635 |
| Genes list of scaffold | scaffold465.1 |
| Synonym | pfu_aug2.0_2497.1_25439 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_465.1_00316.t1 | 1 | 1 | CRAL_TRIO_2 | 20 | 173 | 1.6e-13 | 50.7 | 2.9e-17 | 4.3e-13 | 49.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_465.1_00316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_465.1_00316.t1 atgcaaaggaatgaattaacactagaggacgaccttatcaaacgaaaatggatcatatgtacaggaggaagagacaaatt agaaaaccccttgttgacattccaacttccgaacacactcccgggacagttccaaaaatgttggtcgccagatgacctca ttcgtctattatgtcacatggttgatatgatagaattgatgacgtgccataaatcagtggccttccttctagctctccat aatggatgtagtgaccagaaaataacactaattattcaggcaatacagtcactagagattgacagaaaaggcacggtggc tgtattgtacattgtgaaaccaaagttatcaactaaacgtaaactcttgaagaaactgttaggaatcaaacgaatgaagg actcaaagtccgtatctgagttcaagacagtgatggtaaacagtatatcggagctatacagacatattgacaagacaaac ctcactgaagatcttggaggcacgatacaatatagacatgatgcctttataaatcttcacagtattttgccgtgcgtggc tgtaggagaggacgtacttgatcgacttcaggacgtcagagacaaggtccacctactgagggagtatgacctccacgaca aaacctcacatcaactagtcagtctcagagaggaactacatgagaaatactttaccttgatcagagaaagtgatatcatt ctgacgattgagagatgtaagcaggcgttacatacattagagttatcatccgtggaccgtaagtttgacggtctgctccc tccactggtatctggagtggaggtccacatcaaggctatatatgcgagtttggtccagactcacagtgagctgagtggag tatgggccattgtggagaaggaggtggcggaggaagtatccatcaaacacacaaacgaggaggctgaacagatttgcatg gacattacggaatatttctggccaaacatgtcacagcatcccaaagtcggagaaaatctttatcaagccaaaacgttcag gagagaattcttgatgaacatatacgaaccagcaaaggaattgctggagagggcgacattgattcttcagaagcttcaac aaagtcaccatcagggtgtgtcaggaagaacaggcgtgcgtgacctggtcattagactgtccagaagcatacatccgttt gcatcaagactgaatgtcattaacaaatcgtatgcttctgtacaccagcatttccttttgtacaacaaggttgcaatttg gtataataaaacgatagcgttcctaccaaactcattgtttgagagttgccaacagtcacaaagcacagtttcctttatcc ctgcaccacaagggtggcgacaggttacccggaagttcctgcatgacaatcccgcacctaaagaggaactcttacattca ttggattcttgctcagagactgcttcgtcgaggaacataaaattgcttgtcagcagatattccccatcattgaacgttat ggagggaagcacaaagttgcgacggcgaataagtcgcacaaagagtatacaatcgaaagctgctaatcaaaagagcttca gacgaagggacagacatgtaaacatccatcggtcagtgtcaaacgacaccgatcgtcaaatcagaggaccatactctaaa gaaaggttcatcaatctaagcgatgataacctcctaagaagcatatcagtaccatcttacacacgatacaattgttatgg tgttccatatgaagaggagattatagaagaatcacagtctttcccgaacaaccgagatgtcaataatttagacagtgttt tggactacatcagtaatgttacaagttcgaagggaatctccaaaaataagaagctgcaatacatatctgatgctatttct atgctagacctcaacagtcatgatgaaaacgttaatgagaacgatgattcggatttaaaccataattatttttatggtga tgaatggctcagagcattttcgtatgagagcatcagtcattctggcatttcagatgctgatgcaatagctgatatgagcg atcgtctgtggaagtcagttgatgacgttagtctacatagtcgaggaaattacagcgagaatgcagtacacttagatcag tatgctggttctctgaacgagctgtcaaccaatgacaaagaacgatgcttatggcaggaagttgagagtcgtcagccaat caaaacagactccaaagctagtttgggaacatgtgatgccgatgtgtcttctcgttctaacgatgatactgacgacattg atagtgcagcaccaatactgagaagggatcgtccatccagacaaaatatacgacgaaaacggtatactacagacctaacg gaagttaacatagacgaggccatgagtagatcccgtctcagtcgaagacatagtgacaacttgccttgcataaagtcagt cggaaaagcatctgcgaacaaacctctgtacagaaaagtcaaaccaacaggaagcaaaaatgaggattcacgcagtattg gatccttaccagacgagcacgtgtttcagacaggagacgcctactcctcctcggacataggctatcagagcagtcctaat gatatgaagactaaccataagaccaccaacagaacagctatattcttcttagacagtcagtcctcagtggaggctgaaca aacggcctttacttcgtag |
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Protein
| Protein ID | pfu_aug1.0_465.1_00316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_465.1_00316.t1 MQRNELTLEDDLIKRKWIICTGGRDKLENPLLTFQLPNTLPGQFQKCWSPDDLIRLLCHMVDMIELMTCHKSVAFLLALH NGCSDQKITLIIQAIQSLEIDRKGTVAVLYIVKPKLSTKRKLLKKLLGIKRMKDSKSVSEFKTVMVNSISELYRHIDKTN LTEDLGGTIQYRHDAFINLHSILPCVAVGEDVLDRLQDVRDKVHLLREYDLHDKTSHQLVSLREELHEKYFTLIRESDII LTIERCKQALHTLELSSVDRKFDGLLPPLVSGVEVHIKAIYASLVQTHSELSGVWAIVEKEVAEEVSIKHTNEEAEQICM DITEYFWPNMSQHPKVGENLYQAKTFRREFLMNIYEPAKELLERATLILQKLQQSHHQGVSGRTGVRDLVIRLSRSIHPF ASRLNVINKSYASVHQHFLLYNKVAIWYNKTIAFLPNSLFESCQQSQSTVSFIPAPQGWRQVTRKFLHDNPAPKEELLHS LDSCSETASSRNIKLLVSRYSPSLNVMEGSTKLRRRISRTKSIQSKAANQKSFRRRDRHVNIHRSVSNDTDRQIRGPYSK ERFINLSDDNLLRSISVPSYTRYNCYGVPYEEEIIEESQSFPNNRDVNNLDSVLDYISNVTSSKGISKNKKLQYISDAIS MLDLNSHDENVNENDDSDLNHNYFYGDEWLRAFSYESISHSGISDADAIADMSDRLWKSVDDVSLHSRGNYSENAVHLDQ YAGSLNELSTNDKERCLWQEVESRQPIKTDSKASLGTCDADVSSRSNDDTDDIDSAAPILRRDRPSRQNIRRKRYTTDLT EVNIDEAMSRSRLSRRHSDNLPCIKSVGKASANKPLYRKVKPTGSKNEDSRSIGSLPDEHVFQTGDAYSSSDIGYQSSPN DMKTNHKTTNRTAIFFLDSQSSVEAEQTAFTS |
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