Gene
| Gene Model ID | pfu_aug1.0_46513.1_48625 |
|---|---|
| Locus | scaffold46513.1 : 1 ... 4546 : + |
| To GenomeBrowser | scaffold46513.1:1..4546 |
| Genes list of scaffold | scaffold46513.1 |
| Synonym | pfu_aug2.0_2030.1_01959 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_46513.1_48625.t1 | 1 | 1 | SNF2_N | 3 | 199 | 1.6e-36 | 125.6 | 4.79999e-40 | 1.8e-36 | 125.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_46513.1_48625.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46513.1_48625.t1 acggctgtatatccagtattaatcatttcctatgagatgtttgtacgagcttatgagacaatacagaaattacagtttga tctagttatctgtgatgaagggcatagattaaaaaatacaacaataaaaaccacagctctgataatgagcttgccgacaa gacggagaattgtgttaacagggacacctatacagaatgatctacaggagttcttttccatagttgaattctgcaatcct ggtatattaggaacaagcgctgccttcaaacgagtgtatgaaaccccaattgttgcctctcgccagcctggggccaaagc aaaggaaatagagctcggagaggaaagaggggctgaattagccaggcttaccaaactttttatactacgtaggactcaag aggtcaacaacaaatatctacctcctaaatgtgacattgttgtgttctgtaaacccagtgagctacagttaaggttatac caaaccctgttaggagggcgtatcttccgttcttgtctagccggcaggttggatggatcaccacaccttatttgtatagg agctctgaagcagctgtgtaatcatccgagtctgatctacgacaaggctatagctactgaccaatgtccagaggaatttg aagagttgagcagatatcagaacgtgtactggtag |
|
Protein
| Protein ID | pfu_aug1.0_46513.1_48625.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_46513.1_48625.t1 TAVYPVLIISYEMFVRAYETIQKLQFDLVICDEGHRLKNTTIKTTALIMSLPTRRRIVLTGTPIQNDLQEFFSIVEFCNP GILGTSAAFKRVYETPIVASRQPGAKAKEIELGEERGAELARLTKLFILRRTQEVNNKYLPPKCDIVVFCKPSELQLRLY QTLLGGRIFRSCLAGRLDGSPHLICIGALKQLCNHPSLIYDKAIATDQCPEEFEELSRYQNVYW |
|