Gene
| Gene Model ID | pfu_aug1.0_4660.1_44995 |
|---|---|
| Locus | scaffold4660.1 : 1 ... 3298 : + |
| To GenomeBrowser | scaffold4660.1:1..3298 |
| Genes list of scaffold | scaffold4660.1 |
| Synonym | pfu_aug2.0_1325.1_18266 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4660.1_44995.t1 | 1 | 1 | RVT_1 | 138 | 254 | 1.5e-08 | 34.2 | 2.1e-12 | 3.1e-08 | 33.2 |
Transcript
| Transcript ID | pfu_aug1.0_4660.1_44995.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4660.1_44995.t1 acagtaaaaacacaacgcggaacaaagatcaccggactacacctgtaaggagaatcaaactagaaagaaacctgtgtaaa gacaagaaattgttgaccagtgatgccgaattaccaacacatttactgaaattatatgacgatgcaggacctacaagttc tgatcatgagaagagagaaattgctcagttgcttttacgcaaccaacatgtattttcagagcatgagtttgaccttggat ttactcctcttggggaacatgccattgatacaggtgtacacaaacctgtaaaacagcccccaagacgtgtaccacatgct atggctaatgaagaaaaagagagcattgagaaacttgatgaacaaggaattattaagaaatccacttcaccattggcttc acctgtagttttagtgcgtaagaagtcaggtggtttacgagtgtgtatagattataggaaactcaatgctcttaccctta aggatgcctttccactaccccgcattcaagattatcttgatgttgtttctggtgcttgcttgttttcaacttttgacctg acaagcggctatcaccaagtacctgtaaaacaaagtgatcaagctaaaactgcatttgtaacaaagtatgggctatatga atacacgtctatgcctttcagcttgacgaacgcgcctgtcacatttcaaagaatcatggaaatagcactaagtggtttac agtgggtaacatgtcttatctacttagatgatgtgtgcagcttattccaagatgaggtttgttttctgggccacattgtc aacaaaaatggtgtgaaaccaaatcctgataacacagtgaagatacaaaattggccaacgcccaagactgttaccgaggt tcgccaatttcttggaatggcttcttataaccgtcgctttgtgaaaaattttgcacaaattgcagcccctcttattaacc ttaccaggaagaatgtgagtttccattggacagatgagtgtcagaaatccataaagaaactgaaagagattttgacagga ccagaaatcatggccttcccaaatgatactggtacatatatattgaatacagatgccagtaacaccagcattgggagtgt tctatcacagatacaaaatggacaggagcgtgtgattgctgatgcaagtagagccatgaacaagtccgagaaaaactact gtgtgacagataaagaactcttggctgtacgttattttattgaatacttcaggcaatacttactaggacgaaaatttgtt gtacgtacagatcaccaggccatagtatggttatacaaattcaaggaaccaaaaggtcgaatcgcccgttggattgaaat cctctcttctttcaactttgttatggaatataggccatgcaacaagcattcaaatgctgattcactttctagatgtaaga atccaactgattgtcaatgcccagagatagataatgaaggaagtctgaaatgtggaccatgtcccaagtgtaagagacga ctagtaggggttcctgaacctacctttgttagacgacctcggaagactgatagttcatttgcaactaaggcagtaaaaac caggtctcatgtagaaaaagatgcaacattttggacaacaattagtggcaccgacgtaacaaaaatgcaaccgctacaga atgaagacccggatattaaaccagtgtaccagtggaaactacaggaaactaaacccagtaaggctgaacttgccatgcaa agccctgctactagacactactgcttaatgtgggaatccctagaattacaaaataatgtattcgtgaaaattcaccctaa caaggaggggttgggagatgatacacagcttatcacacctaagaagcttcagcaagccattttgttctacaatcacgatt caatgatgtcgggtcacttaggagacaacagaacttggaagaaacccgtgccaaattttactggtacgaaatga |
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Protein
| Protein ID | pfu_aug1.0_4660.1_44995.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4660.1_44995.t1 SKNTTRNKDHRTTPVRRIKLERNLCKDKKLLTSDAELPTHLLKLYDDAGPTSSDHEKREIAQLLLRNQHVFSEHEFDLGF TPLGEHAIDTGVHKPVKQPPRRVPHAMANEEKESIEKLDEQGIIKKSTSPLASPVVLVRKKSGGLRVCIDYRKLNALTLK DAFPLPRIQDYLDVVSGACLFSTFDLTSGYHQVPVKQSDQAKTAFVTKYGLYEYTSMPFSLTNAPVTFQRIMEIALSGLQ WVTCLIYLDDVCSLFQDEVCFLGHIVNKNGVKPNPDNTVKIQNWPTPKTVTEVRQFLGMASYNRRFVKNFAQIAAPLINL TRKNVSFHWTDECQKSIKKLKEILTGPEIMAFPNDTGTYILNTDASNTSIGSVLSQIQNGQERVIADASRAMNKSEKNYC VTDKELLAVRYFIEYFRQYLLGRKFVVRTDHQAIVWLYKFKEPKGRIARWIEILSSFNFVMEYRPCNKHSNADSLSRCKN PTDCQCPEIDNEGSLKCGPCPKCKRRLVGVPEPTFVRRPRKTDSSFATKAVKTRSHVEKDATFWTTISGTDVTKMQPLQN EDPDIKPVYQWKLQETKPSKAELAMQSPATRHYCLMWESLELQNNVFVKIHPNKEGLGDDTQLITPKKLQQAILFYNHDS MMSGHLGDNRTWKKPVPNFTGTK |
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