Gene
| Gene Model ID | pfu_aug1.0_4664.1_52333 |
|---|---|
| Locus | scaffold4664.1 : 34076 ... 51719 : + |
| To GenomeBrowser | scaffold4664.1:34076..51719 |
| Genes list of scaffold | scaffold4664.1 |
| Synonym | pfu_aug2.0_858.1_27855 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_4664.1_52333.t1 | 2 | 1 | SAM_1 | 105 | 139 | 7.2e-22 | 77.3 | 6.4e-06 | 0.032 | 14.4 |
| pfu_aug1.0_4664.1_52333.t1 | 2 | 1 | SAM_2 | 107 | 138 | 1.4e-15 | 56.8 | 0.00048 | 2.4 | 8.0 |
| pfu_aug1.0_4664.1_52333.t1 | 2 | 2 | SAM_2 | 135 | 199 | 1.4e-15 | 56.8 | 4.1e-17 | 2.0e-13 | 49.9 |
| pfu_aug1.0_4664.1_52333.t1 | 2 | 2 | SAM_1 | 137 | 199 | 7.2e-22 | 77.3 | 1.6e-21 | 8.0e-18 | 64.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_4664.1_52333.t1 | gi|224075166|ref|XP_002190394.1| | 4.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_4664.1_52333.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4664.1_52333.t1 atgtgttgtaatgcacgtagacctcccgtggttaccgacggatttggagtagaccatagcgtgttcgcctatccaccctc accttaccatacccttcattcttcgtttgagcactcgcacagctaccccaacgttcagatcaacaataatcaccggctgt cgggacagagctgcgagtcgggtgtgtcctcccgccagagttatcatagtaattccagctctagtctaggcagtctggat cgactggaggaaaccggacatatcagccagatcaatgtggctgagctgttcagggccggtatgccggatcatgaggtgct gcgagcctggctccgtgacctgcattttgaggaatactacgaatgcttcatgaaagccggttatgatatgcccaccatat ctcacatgactccacagaatgacgtaatggagtggttacacagactgggattagagcagtattaccagactctgttacag caggggtatgataacatagactacgtcacggacatcatgtgggaagatctggaggaaatcggcatttctaaattaggtca ccagaagaagataatgcttgcaatcgacagattaaaaagaataacgactaactataaacgtgcctctaccatggaagcta ggaggggatcaagtgaaatcttggatccaccatcaacgttcaacactagatggtcaggagaagactacacacaggatctg cctcagtcgccttttaagaatcgtaaatcttcatcgggtgataatataaacatgaataatattggcacaccgccagatca ccgattttcacatcatagtgatagactaagtcaccatagtgacgggagttcagagttcatgccctctagtccaatcgttg gcggttaccaaccagatgtagtagctatacaagtcaaacgacattcgtctcagtctggctcacctaaagacatggcgggt caacctataacgtaccaatcttttcaagtcccggcatcaccaaaggataaggaaagtagagacagcactccaactgcgga ggataatgaaatgtcaggttcaccagtgactgtggcaccaatggtgcctaaagcagtgattaaacccaaacctgtcgcta agataatagcaaagactaaacggagcagtcgtgagtgctctcctgatattattgatgtggaaaaacacgaggtcgagaaa aatcaggatatgaacatgagtccgaaaaccaatcagactttctttccgtcgggtgtgaaagtgaccatgagtcagtcaga tcatatttatgataaacctcgattaccagcttcccccaagtctcacagtcattatcaagtgccaaatgtttctatgtcac agtcattgccaaacggtcaaaccagtgcactatatgtctcaactcaacaagatctgacggttccgtcacagagttcgcca aaaagtcgaaaagtgcctcctcctccacctcctaaacgaacaaattcaatttcaaatcgtcaggatgcaaactttgctgg gagcatccccaaatctgccattcagtctacctatgctcatgttcagaggacgtcctcacaatctcaaaacggtaacgacg tgctctcttctcaaccggcacctaagtcagcgaacaataactccccaaaacaaactgctcctgtcgttaatcaggtctca cagaacatttctcctaaccaacaagcctttgcttcttgtgttcagagtttatcagaaaaatttggaagcaaacggaagga gttaacaaatgacgagaacctgagttctgatggggaggacttccctcctcctcccccgcccattgccatggacatcatta cgccaaaaattcataattacggaataccgtctaaaaatgacaaagtgggaagtgactacagaataaaacccaaagtggaa tcaccaagtcataataataaagttcataataatatttataataataattcttcaaacagtgcagcttttgacgttaaatt gaaaagaacggcagtcgctaatatttctcataatacagtgtctcattcttcatctccaattttaccggcgaaatctcatg caacagcacaatattcgccctcgaggcaagaaccgtcaaaggtaactaagtcaacggaatcggaaaaaccattgccgagt gttaaacccacagtggagaatttagaattgaagagaaaggactcaacctcaagtcatgattctactgtgtcaacatcaag tattgattccaatactttaccttttgctaatgagaatgtaggaacgattaaacagcgtacgcctacaactaaaccctcga tagtgccaataaatgagaatgcggaaccaaaagactccattctcccaatgacaaacagtgctcatacctttagaccctct gttccacagaaaccttcatcaactcacaaaggtactttaccttga |
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Protein
| Protein ID | pfu_aug1.0_4664.1_52333.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_4664.1_52333.t1 MCCNARRPPVVTDGFGVDHSVFAYPPSPYHTLHSSFEHSHSYPNVQINNNHRLSGQSCESGVSSRQSYHSNSSSSLGSLD RLEETGHISQINVAELFRAGMPDHEVLRAWLRDLHFEEYYECFMKAGYDMPTISHMTPQNDVMEWLHRLGLEQYYQTLLQ QGYDNIDYVTDIMWEDLEEIGISKLGHQKKIMLAIDRLKRITTNYKRASTMEARRGSSEILDPPSTFNTRWSGEDYTQDL PQSPFKNRKSSSGDNINMNNIGTPPDHRFSHHSDRLSHHSDGSSEFMPSSPIVGGYQPDVVAIQVKRHSSQSGSPKDMAG QPITYQSFQVPASPKDKESRDSTPTAEDNEMSGSPVTVAPMVPKAVIKPKPVAKIIAKTKRSSRECSPDIIDVEKHEVEK NQDMNMSPKTNQTFFPSGVKVTMSQSDHIYDKPRLPASPKSHSHYQVPNVSMSQSLPNGQTSALYVSTQQDLTVPSQSSP KSRKVPPPPPPKRTNSISNRQDANFAGSIPKSAIQSTYAHVQRTSSQSQNGNDVLSSQPAPKSANNNSPKQTAPVVNQVS QNISPNQQAFASCVQSLSEKFGSKRKELTNDENLSSDGEDFPPPPPPIAMDIITPKIHNYGIPSKNDKVGSDYRIKPKVE SPSHNNKVHNNIYNNNSSNSAAFDVKLKRTAVANISHNTVSHSSSPILPAKSHATAQYSPSRQEPSKVTKSTESEKPLPS VKPTVENLELKRKDSTSSHDSTVSTSSIDSNTLPFANENVGTIKQRTPTTKPSIVPINENAEPKDSILPMTNSAHTFRPS VPQKPSSTHKGTLP |
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